Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00359 ATGGATCCAGAAAAATCAGTGGAGGATCAATTCTCCAAGCTACATCCTTCCATGCCAGTAAACACCAAAATTGGAATAGTGGGTGCCGGTCCAAGTGGCTTATCAGCTGCTTATGCACTGGCCAGGCTTGGATATAATAATATCACTGTCTTGGAGAAACATCATTCAGTTGGGGGCATGTGTGAGTCAGTAGAAATTGAAGGAAGAGTTTATGATCTAGGTGGCCAAGTTCTGGCTGCAAGCAGTGCTCCGATCATCTTTCACTTGGCTAAAGAGACAGGTTCTCCACTAGAAGAAATGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCAGGAAAATATCAAGATGTCAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTAGCAATCCAAGAAAAGGTGAAGAATTCTGGTCGTTTAGGGGTGCATGCTGTCAGTGAAGTTGCTTCGGACTTAGCTCCAGATTATCTTGAGCTTCATGGACTTAAATCTGTCCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATACGGGTTCATTCAAGACATGCCTTATGCCTACATTCATGAATTTACTAGAACTTCCATGGCTGGAAAAATTCGACGTTTTAAAGGTGGATATACGAGTCTTTGGCAAAGGATTGCTGAATCACTTCCTATAAAACTTCACTGTAGCACTGAGGTGTTGGCAATCAAGAGGAATTCTGACAGTGTCACCGTTAATGTCAAGAGCTCAAATGAAATTGAAACTATGGAATTTGATAAGATCATAATCTCGGGTAATTTTCCATTAAAATATGGAAGAACGTATAGATCAGTGCCTTCAACTAGCTTAGAGTGTGAACCAGAAGTAATGGATGTAAGTGAGCTTGAAAAGGATTTGTTCAGCAAAGTTGAAACAAATGATTACTACACAACTGTTTTAAAGATCAAGGGAATGGAACATATGCCCGTTGGATTTTATTATTTTAGAGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAAAAGTTTTATGCAGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGCTGATATTAAGGGACCAACTGTTACTGAGCTAGCAATCAAATCAATAAAGTCCATGGGGGGAGAAGTTGAGAATTTCATTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTCAGTAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTTGGCGGGCTTATGGCATTTGAGCTTACTGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTCGCAAATAACAGTGATTTGCCAGTGTTTCCTTACACTAAGAAGTGTCTTCTGCAGAGTTTGTTTCCCTTGCAAACTGAGTTCCAGAAAAAGGAGCCTAAAGAACTAGGTGAATTGCCCGGAGTGCAATTTCCCAATTTGCCAACTTTGAATAGCTATTTAAAGCATTGGGGAACTCATCCAGTCACACAAAATAGAACTCTTTACACTTGGATAAATGAAGGAGGAACAGTGGGTGGCAAGAGGACATATGGAGAACAACACTTAAATGCTTCTTGTATTGCACATAAGCTCTTAACAAGTCAAAAGCCAGTTATAATGCCTGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGTCTGGATTTCATTGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCAGTCCCAGTTCTTCCCCCGGACCCCCTGCAAAGAGGTGGACAAGCACTCCTAAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTGGCGATTTTATCAACAGTGGCTTATCACTCAGCAGTACGTGCAGGTCTAGTGAAAAGTTTGATGATCTCACTGACTGGAAAAAATGGGAAATCCGCAGCTCAGTGGCCTAAACTTCCTTGGCTGCACACTGATACTTGGGTCAATAATAACTCACGAAATTTGGCTTTGGAAGATGTAGATGATCAATGTGAATCCAAGCCTGCTGATATATGTTTCTTGCAGTTTACCTCAGGTTCAACAGGTGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCATTCACAATGTGAAATTGATGAAAACTATATACAAGAGCACCTCAAGGACAATGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTATTAGTGGTGGATCTGCCGTGCTTTTCTCACCAATGACATTTATTAGGAAACCACTCTTATGGCTTGAAACCATAAGCAAGTATCAAGCAACTCACAGCGCTGGCCCCAACTTTGCTTTTGAGTTGGTGGTTCGAAGGTTAGGGCTTGAAAAAGACAAGCTTCAGAAATTAAACCTTTCATCCATGATTTTTCTCATGGTTGCTGCTGAGCCAGTGAGACTGAAGACCTTGAAAAGATTTCTTGATTTAACCGCTCCTTTTGGCTTATCTCAGAAAGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGAAAAGGGTGTCCTATTCTTGTTGACTGGCAAGGAAGAGTTTGTTGTGGATATATTCACCCTGGTGATGCAGATATAGACATTAGAATAGTTGATCCAGAGAATGGTGAAGAGCTTCAAGAAGATGGAAAGGAAGGAGAAATCTGGTTAAGTAGTCCAAGTGCAGGAATAGGATATTGGGGAAAGGAAGAACTGAGCCAGAAAACTTTTAGAAATGAGCTTCAGAACCATCCTGGACGAAACTACACAAGAACTGGAGACTTGGGAAGAATAATTGATGGGAAGCTATTCATCACGGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAAACAGTTGAGAGTTCATCTGAATTTCTTCGTCCTGGGTGTTGTGCAGTCATTGGTGTCCCTGAGGAGGTATTATCAGCAAAGGGGATTTCTCTGCCAGATGGATCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAAACCGTGAGCAAAGATGTGATTGAGCAAATTCAGACTCGTGTGGCAGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACGATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCAGATGAAACATTGAACTTGGTGCCTCAACCTATTCTGACAAGGAAATCACTGGTAAGGTCATTTACTACAGGAACATGCACAGAAGGAAGAACACCCCGGGCCCAGCTGGTGAGAAGTAGTAATCCCCTACCTATTCCAAGATTCAATAACCAGGAAATTGTTGAACACTTGAAACGGCTAATATCTGAGCATTCAGGAATCCCAATCAAAGATATATCAGTCACCGACAACATGTCAACATATGGAATTGATTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTGGGTGTGCCAGTTGCAGCTATAGATGTTTTTACAGCATCAGACATTCAAGAATTGGCTAACTTCTCAGAGAATCTTCTGTCGAAGTCTCAACCTGAAGTTATGAGCAATTCATCCCAAGCTCCAGAAACTGAAATTGACTCTAGTGAAGTGGTTGTGGATGTGTCCAGGTCTCGTCAATGGGGTATTCGTTTACTTCAACTCCTAGCCCTTATTTATATTTCTATCATTCTAGTTTCTCCTGCTTATCTATCCATCACTTCTTTTCAAAATTTCATACCAAATGCCAGTGAATCGGTAAATGGAACGCCTTGGTCAAACTATTTGCTTTCCTTGATTTTGGCACCCCTTTCTTGGATCCTTTGCATGGTTTATACTTGCATTGGCATTTCAATTTTTGGGAATTCATTCTTGAGGCCAAACTATGCGCTGACACCCGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCGCTCTATAAAACTCAGGAAATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCTAGAATTGGATCCTTAGTTTTGCTGGACACAGTTGATATCACAGACCCGTCTCTGGTTTCTATTGGAGATGAAGTTGCCATGGCAGAAGGGGTTTTGATTCAAAGTCATGAGGTGAGGAATGGAATTCTAAGTTTCCTCCCTATTAGGATAGGTAAAAATTCTTCAATCGGGCCTTATTCTATTATTCAAAAAGGAAGTGTTATCAAAGAAGGATCTGAAGTACAACCCCTGCAAAAGGTTGAAGAATGCCAACATGTGCCCAAACCTGCCAAGCTTAATAACGTTAAGGAGGTCAGTATAGGCAAATTTCTGAAATGA 4419 0.4103 MDPEKSVEDQFSKLHPSMPVNTKIGIVGAGPSGLSAAYALARLGYNNITVLEKHHSVGGMCESVEIEGRVYDLGGQVLAASSAPIIFHLAKETGSPLEEMDSHKLAVIDSSSGKYQDVKVADDYVSVMSLTLAIQEKVKNSGRLGVHAVSEVASDLAPDYLELHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCSTEVLAIKRNSDSVTVNVKSSNEIETMEFDKIIISGNFPLKYGRTYRSVPSTSLECEPEVMDVSELEKDLFSKVETNDYYTTVLKIKGMEHMPVGFYYFREYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTVTELAIKSIKSMGGEVENFILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFANNSDLPVFPYTKKCLLQSLFPLQTEFQKKEPKELGELPGVQFPNLPTLNSYLKHWGTHPVTQNRTLYTWINEGGTVGGKRTYGEQHLNASCIAHKLLTSQKPVIMPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPLQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGLVKSLMISLTGKNGKSAAQWPKLPWLHTDTWVNNNSRNLALEDVDDQCESKPADICFLQFTSGSTGDAKGVMITHGGLIHNVKLMKTIYKSTSRTMLVSWLPQYHDMGLIGGLFTALISGGSAVLFSPMTFIRKPLLWLETISKYQATHSAGPNFAFELVVRRLGLEKDKLQKLNLSSMIFLMVAAEPVRLKTLKRFLDLTAPFGLSQKVMAPGYGLAENCVFVSCAFGKGCPILVDWQGRVCCGYIHPGDADIDIRIVDPENGEELQEDGKEGEIWLSSPSAGIGYWGKEELSQKTFRNELQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEEVLSAKGISLPDGSDQVGLVVVAEVRDGKTVSKDVIEQIQTRVAEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPILTRKSLVRSFTTGTCTEGRTPRAQLVRSSNPLPIPRFNNQEIVEHLKRLISEHSGIPIKDISVTDNMSTYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASDIQELANFSENLLSKSQPEVMSNSSQAPETEIDSSEVVVDVSRSRQWGIRLLQLLALIYISIILVSPAYLSITSFQNFIPNASESVNGTPWSNYLLSLILAPLSWILCMVYTCIGISIFGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLLDTVDITDPSLVSIGDEVAMAEGVLIQSHEVRNGILSFLPIRIGKNSSIGPYSIIQKGSVIKEGSEVQPLQKVEECQHVPKPAKLNNVKEVSIGKFLK 1472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00359 1472 Gene3D - 303 396 - -
Spst5g00359 1472 ProSiteProfiles Carrier protein (CP) domain profile. 1129 1203 IPR009081 -
Spst5g00359 1472 Gene3D - 960 1087 IPR045851 -
Spst5g00359 1472 SUPERFAMILY Acetyl-CoA synthetase-like 498 1085 - -
Spst5g00359 1472 Gene3D - 94 202 - -
Spst5g00359 1472 ProSitePatterns Putative AMP-binding domain signature. 687 698 IPR020845 -
Spst5g00359 1472 SUPERFAMILY Trimeric LpxA-like enzymes 1364 1441 IPR011004 -
Spst5g00359 1472 Gene3D - 1125 1230 IPR036736 -
Spst5g00359 1472 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Spst5g00359 1472 Pfam AMP-binding enzyme 527 965 IPR000873 -
Spst5g00359 1472 ProSitePatterns Phosphopantetheine attachment site. 1158 1173 IPR006162 -
Spst5g00359 1472 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 132 1439 - -
Spst5g00359 1472 PRINTS Adrenodoxin reductase family signature 23 45 - -
Spst5g00359 1472 PRINTS Adrenodoxin reductase family signature 47 60 - -
Spst5g00359 1472 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Spst5g00359 1472 Gene3D - 487 959 IPR042099 -
Spst5g00359 1472 Gene3D Hexapeptide repeat proteins 1347 1454 - -
Spst5g00359 1472 SUPERFAMILY ACP-like 1125 1217 IPR036736 -
Spst5g00359 1472 Pfam Phosphopantetheine attachment site 1135 1198 IPR009081 -
Spst5g00359 1472 Gene3D - 23 446 IPR036188 -
Spst5g00359 1472 SMART Phosphopantetheine attachment site 1132 1203 IPR020806 GO:0031177
Spst5g00359 1472 CDD FAAL 504 1079 IPR040097 GO:0008610
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00359 Spst-Chr5 2982540 2987567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00359 677 1076 Monolignol Biosynthesis Gene Families AT4G05160 26.521 2.40e-20 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00359 - - pcin:129313184 2346.24