Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00343 ATGAACATGAACCTATGGCCAGTCCGATTCGGGACTCTATTTGAGGTTGTGGTTTTCTCATGCTTGTGGTTGCAAGTTTCAAGTCTTGGCTCCATGTCTTCCATTGCTGTCACTTATGGCGACAAAGGGTCTGCGTTTTGTGGCTTGAAATCGGATGGATCTCACACTGTGAACTGTTATGGGATGAACTCAGCCATAATTTATGGAACACCAACACATTTTCCTTTCTTTGGTCTAACTGCCGGTGATGGCTTTGTGTGCGGGATTTTAATGAGTTCTAGTCAACCATATTGCTGGGGTAGCAGTAGCCATGTTGAAATGGGTGTGCCACAACCTATGGTTAAGGGAGCTCAGTACCTAGAGATCAGTGCTGGGGATTATCACGTTTGTGGATTGAGGAAACCATTGACTGGAATACACAGGAATACTTCTTTGGTTGACTGTTGGGGGTACAACATGACAAATAACTATGTGTTTGATGGGCAGGTTCAATCCATATCAGCTGGTTCTCAATTCAATTGTGGCTTGTTTTCTCAGAATAGAAGTGTGTTCTGCTGGGGGGACGAGACTAGTAGCCAAGTTATTAATATGGTCCCAAAAGGCATGAGGTTCCAGAAGATCTCTGCTGGAGGGTACCATGTGTGCGGAATCTTAGAAGGGGTGAACTCTAGAGCTGTTTGTTGGGGGAGGAGCTTGCTGGATTTTGGGGAAGAACTTTCAATTTCATTGACACGTTCAGCACAAGGACAAGGTAACGTTGAATTGGCTCCAAATGATCCCATGCTTTCTGTGGCGGGAGGGAAGTTCCATGCATGTGGCATTAGGAGCTCTGATCGTGGAGTGGTTTGTTGGGGTTATAGTTTCAAAGCAGGCACCCGAGTTCCCAGTGGGATTAAGGCCTTTGAGATTGGTGCTGGAAATTATTTTACCTGTGGAGTACTTGTTGAGAAATCTCTTATGCCTGTTTGTTGGGGCGTTGGCTTCCCTACTTCTCTCCCTTTGCCTGTCTCACCAAGAATGTGTAGGACTACTCCATGTCCTCCAGATTACTTTGAAACCTCACAAAATGGTCTTTGCAAGTCACCAGATTCCCATGTTTGCATGCCATGCAGTGCTGCTTGTCCTCCTGAGATGTATAAGAGAAGGGAATGCAATTTGAAATCTGACATACTATGTGAATATAATTGTTCTCTTTGTACCTCTCCTGAATGCCTCTCCAATTGCTCCTCTTCCTATTCCAATGCTGCCTCTGGCAAGAGAAGTGAAAGATTTTGGTCTCTACAACTGCCGGTGATTATTGCTGAGATAGCTTTTGCTGTTTTCTTTGTTTGCATTGTGTCTATAACTGCTGTGTTGTATGTTCGCTACAAGCTAAGAGATTGTCAGTGTTCTTCTGCGGGAGGGTCAATGGGGAAGAAAGTAAAAGAGAGTTCCTCAAACCAAAAGGAGAAATCCAAGGTCCGACCAGACTTGGAGGAGTTCAAGATTAGGAGGGCACAGATGTTCCCTTACGAGGAACTTGAAAGAGCAACTAGTGGATTCAAAGAAGAGTCCATAGTAGGGAAGGGAAGTTTTTCTTGTGTGTTCAAAGGGGTTCTCAAAGATGGCACTGTTGTTGCTGTTAAAAGGGCCATAATGTCTCCCAACGTGCAGAAGAATTCCAAGGAGTTTCACACTGAGCTTGACTTGCTTTCTAGGTTGAACCATGCACACTTGCTCAATCTACTAGGCTACTGTGAAGAAGGTGGAGAGAGACTCCTGGTTTATGAGTACATGGCTCATGGTTCATTGCATCAACACCTTCATGGCAACAAAGTGATGAAAGAGCAAATGGATTGGGTGCGAAGGGTAACAATAGCAGTGCAAGCAGCTCGCGGAATCGAATATTTGCACGGCTATGCTTGTCCGCCAGTGATTCATAGAGACATCAAGTCTTCAAACATCCTCATTGATGAAGAACACAATGCCAGAGTGGCTGATTTTGGTTTGTCACTACTTGGTCCTGCAGATAGTAGCTCCCCACTGGCTGAACTACCAGCTGGGACTCTTGGCTATCTTGATCCTGAATACTATAGGCTTCATTACCTTACCACGAAGTCTGATGTATACAGCTTTGGTGTTCTACTTTTGGAGATATTGAGTGGCAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATTGTTCAATGGGCAGTGCCTCTGATAAAGTCGGGAGATATAGCTTCAATTTTAGATCCAGTTTTGAAACCTCCTCCTGATCTTGATGCACTGAGAAGAATAGCTAATGTAGCTTGTAAAAGTGTGAGAATGAGGGGGAAGGATAGGCCTTCAATGGACAAAGTGACAACAGTTTTGGAGAGAGGTCTTGTACAGTTGATGGGGAGTCCTTGCATTGAGCAGCCAATTTTGCCAACTGAGGTGGTTTTGGGAAGTAACAGATTGCACAAAAAATCATCTCAAAGGTCTTCAAACAGGTCAGCCTCAGAAAGCACTGATGTGGAGGATCAGAGGTTTGAGTTTAGAGCACCCTCATGGATCACCTTCCCCAGTGTCACTTCTTCTCAAAGAAGATCAGGTTCAGAGGCTGATGTTGAGGGTAAAAATGCAGAAGGGAGGAATTTGGGCAATGTTGGAGGTGGTGATGTTTTAAAAAGTCTTGATGAAGAGATTGGTCTTGCCTCTCCTCAAGAGAAACTCTTCTTGCAACACAACTTCTAA 2721 0.4447 MNMNLWPVRFGTLFEVVVFSCLWLQVSSLGSMSSIAVTYGDKGSAFCGLKSDGSHTVNCYGMNSAIIYGTPTHFPFFGLTAGDGFVCGILMSSSQPYCWGSSSHVEMGVPQPMVKGAQYLEISAGDYHVCGLRKPLTGIHRNTSLVDCWGYNMTNNYVFDGQVQSISAGSQFNCGLFSQNRSVFCWGDETSSQVINMVPKGMRFQKISAGGYHVCGILEGVNSRAVCWGRSLLDFGEELSISLTRSAQGQGNVELAPNDPMLSVAGGKFHACGIRSSDRGVVCWGYSFKAGTRVPSGIKAFEIGAGNYFTCGVLVEKSLMPVCWGVGFPTSLPLPVSPRMCRTTPCPPDYFETSQNGLCKSPDSHVCMPCSAACPPEMYKRRECNLKSDILCEYNCSLCTSPECLSNCSSSYSNAASGKRSERFWSLQLPVIIAEIAFAVFFVCIVSITAVLYVRYKLRDCQCSSAGGSMGKKVKESSSNQKEKSKVRPDLEEFKIRRAQMFPYEELERATSGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNVQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGNKVMKEQMDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWAVPLIKSGDIASILDPVLKPPPDLDALRRIANVACKSVRMRGKDRPSMDKVTTVLERGLVQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSASESTDVEDQRFEFRAPSWITFPSVTSSQRRSGSEADVEGKNAEGRNLGNVGGGDVLKSLDEEIGLASPQEKLFLQHNF 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00343 906 FunFam Receptor protein kinase CRINKLY4 592 793 - -
Spst5g00343 906 Gene3D Phosphorylase Kinase; domain 1 483 591 - -
Spst5g00343 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Spst5g00343 906 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 345 392 IPR001368 GO:0005515
Spst5g00343 906 Gene3D - 79 346 IPR009091 -
Spst5g00343 906 MobiDBLite consensus disorder prediction 815 836 - -
Spst5g00343 906 SUPERFAMILY Protein kinase-like (PK-like) 494 786 IPR011009 -
Spst5g00343 906 ProSiteProfiles Protein kinase domain profile. 514 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00343 906 SUPERFAMILY RCC1/BLIP-II 252 338 IPR009091 -
Spst5g00343 906 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 15 906 - -
Spst5g00343 906 Gene3D Transferase(Phosphotransferase) domain 1 592 793 - -
Spst5g00343 906 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Spst5g00343 906 MobiDBLite consensus disorder prediction 852 881 - -
Spst5g00343 906 FunFam serine/threonine-protein kinase-like protein CCR1 484 591 - -
Spst5g00343 906 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 94 135 IPR000408 -
Spst5g00343 906 MobiDBLite consensus disorder prediction 465 486 - -
Spst5g00343 906 Pfam Protein kinase domain 514 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00343 906 FunFam Serine/threonine-protein kinase-like protein CR4 28 195 - -
Spst5g00343 906 SUPERFAMILY RCC1/BLIP-II 27 231 IPR009091 -
Spst5g00343 906 SMART serkin_6 514 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00343 Spst-Chr5 2860755 2863475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00343 13 906 Receptor kinase-like Gene Family AT3G59420 65.967 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Spst5g00343 Pkinase 4.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00343 - - gmx:100807392 1654.03