Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00334 ATGGGATACAAGATGTCAGCCCATTCAGCCCAGGCCACTTCTCACTTGCAGCGCTTGCAAGTTGTGGAGATGTGTAGCAGATGTAGCTCGGCCCATTCAACTGAAGTCACTCTGCGCATGCAGCACTCACAACTTGTGGGATTGTGTGGTGGGCCATGCCTTGTTTTGCCCCGGGAATCTGTTATATTCCCTGGGATGCTGCTTGCTGCTTGCAAAGTGTACATGCTCGTCCATCATCTCGGCTATCTTGTAGAGTTGCTACATTATCCTCTCACTAACATTTGGAAAACCCTGTTCAGAAAGGGAGGGTTGTGTGCCAGAGGAATTGAAACCCATGATTCTGTCTCCATGGATAAGGATAAATCTCTAGGTCACAGTGGAGGTTTGCCACCTCCGTCGGGACGTTATTCGGGTTACTCACCCGCTGGAACTGTGTTCAATGTGAAATCGGAGCCACCGACGTCGTCGACGTCGTCGTATCCGCCACTGGCTCCGGGAGTCTCCACGCCGGAGTCTAGTGGGTTTAGTCATGATATTAGCAGAATGCCCGATAATCCCCCGAGAAATAGAGGTCATAGGCGTGCTCATTCCGAGATTCTCACTCTACCGGATGATATTAGCTTTGACAGTGACCTTGGTGTGGTTGGAGGTGCTGATGGGCCTTCGTTCTCCGATGAGGCCGAGGAGGACTTGCTGTCTATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCGACGTCCACGTTTCAAATGGGCGAGCCGTCTGGTGTGGTGGGAGCGTCGGGTTCAACGTTGGCGACCGGGGTACCCACCTCTTCTGCAGAAAATATTGCTGTTGGCGGTACTCATGAACGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGATGGGTCAACTACTATCAAGCCTGAGATGCTGGTTTCTGGTTCGGAAGACATGTCTGCGGCGGATTCCAAAAAGGCAATGTCAGCTGCCAAGCTTGCTGAGCTTGCTTTGATTGACCCCAAGCGTGCAAAACGGATATGGGCAAATAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGGTACATTGCTGAGCTTGAAAGGAAGGTGCAAACATTGCAAACGGAAGCAACATCTTTGTCTGCGCAATTAACTCTATTGCAGAGGGATACAAATGGCTTGAATTCTGAGAACAGTGAACTGAAGCTGCGGCTACAAACCATGGAGCAACAAGTTCACTTGCAAGATGCACTAAATGACGCATTAAAAGAGGAAATTCAGCATTTAAAAATACTGACTGGGCAAGCTATGCCACCTAATGGAGGACCTATGATGAACTTTACCTCTTTTGGAGGGGGGCAGCAATTCTATCCCAATAATCATGCGATGCACACCCTTCTAGCTGCACAACAGTTTCAACAACTCCAAATTCATCCTCAGAAGCAGCAGCATCAGCATCAGTTTCAGCAACTTCAACAACAAATGCTGCAACAGCAACAGCGGGATCAACAACACCAACCATCAAGCGACTTGAAAATGAGAGAAGCTTCACCTTCTCCATGCCCCAAAGACAATGCGTCGTCAGATGTAAATCCTTCTGGGGCGAAGGACTGTTGA 1611 0.4929 MGYKMSAHSAQATSHLQRLQVVEMCSRCSSAHSTEVTLRMQHSQLVGLCGGPCLVLPRESVIFPGMLLAACKVYMLVHHLGYLVELLHYPLTNIWKTLFRKGGLCARGIETHDSVSMDKDKSLGHSGGLPPPSGRYSGYSPAGTVFNVKSEPPTSSTSSYPPLAPGVSTPESSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDEAEEDLLSMYLDMDKFNSSSATSTFQMGEPSGVVGASGSTLATGVPTSSAENIAVGGTHERPRVRHQHSQSMDGSTTIKPEMLVSGSEDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGPMMNFTSFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQQHQHQFQQLQQQMLQQQQRDQQHQPSSDLKMREASPSPCPKDNASSDVNPSGAKDC 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00334 536 Gene3D - 337 390 - -
Spst5g00334 536 Coils Coil 479 499 - -
Spst5g00334 536 CDD bZIP_plant_RF2 339 388 IPR044759 GO:0003700|GO:0006355
Spst5g00334 536 MobiDBLite consensus disorder prediction 475 511 - -
Spst5g00334 536 SMART brlzneu 334 398 IPR004827 GO:0003700|GO:0006355
Spst5g00334 536 MobiDBLite consensus disorder prediction 147 194 - -
Spst5g00334 536 MobiDBLite consensus disorder prediction 147 179 - -
Spst5g00334 536 Coils Coil 354 423 - -
Spst5g00334 536 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 336 399 IPR004827 GO:0003700|GO:0006355
Spst5g00334 536 FunFam probable transcription factor PosF21 337 390 - -
Spst5g00334 536 Pfam bZIP transcription factor 338 396 IPR004827 GO:0003700|GO:0006355
Spst5g00334 536 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 152 505 - -
Spst5g00334 536 MobiDBLite consensus disorder prediction 282 302 - -
Spst5g00334 536 MobiDBLite consensus disorder prediction 475 536 - -
Spst5g00334 536 SUPERFAMILY Leucine zipper domain 338 389 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00334 Spst-Chr5 2778420 2789287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00334 135 467 bZIP Transcription Factor Family AT1G06070 73.353 1.21e-169 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst5g00334 bZIP_1 3.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00334 - - gmx:100786738 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00334 5 2778420 2789287 Spst5g00334 5 2778420 2789287 ECH
Spst5g00334 5 2778420 2789287 Spst2g02431 2 23962048 23965161 PCT