Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00302 ATGGCTTCAAATGCAGGAGAAGGAGAGTCCACCTTGATCGCCATTGATATCGATCGGAACAGCCAACATGCAGTCAAATGGGCTGTGGAACATCTCTTGAAGAACAACTCCCCTTGCACCCTAATTCACGTCACAACGAAAAACTTACATCCAAATGATTTCGAGGTTTTCCCTAAGCAAGGTCGTCCACCAACAGAAGAAGAATCGCAGCAGTTTTTTCTTCCCTTCCGAGGATTCTGTGCTCGAAAACGGGTGGTAGTTAAAGAGTTAGTTCTGCATGACATTGACGTATCAAACGCTCTTGCCAATTTCATAGTTGACAACTCTATCAACAACGTTGTTCTTGGTGCTTCTCGCTCCAATTCTCTCATAAGGAAATTTAAAGATGTAGATCTTGCAGCAAGCTTAGTGAGGTCTGTGCCAGAGTCTTGCATGGTGCATGTTGTATCAAAGGGAAAAGTGCAGAATATTCGACCAGTAGGTCATTCTCAAACTATTAGTATTTCGCCATTAAAATCTCTAAAAGGGATTAGGGGAAGTTTTCGTTCCAAAGATTTAAACAGAAAATCGTTGAAGTATAAATTTTGGCAAGGCTCGAACAATGACGAGGTATATGCGGTCACACCACACAAGACTCATGGAGCGACAACTTCTCCAAAACCATTGGATGAAACTCACACCATACAAAATTCACCCGATCAAATGACTCCGATATCAAATGAAAACCAATTTATTGTCGATAAATCAGATAATCACACTCGCAAGAGCAAATTTTGTAAAAAGTCCCGAGCAACAAAGACTATGCAAAAAGAGGGAAACTTAGAAAAAGATAAGCTTGTTGAAGTGCCTACATTAACATTGACAGAGATGGAAAGAGAAAAACTTGAGACAACTGTGAAGTCAGTTGAAATATCAAAACAAATGGAAGTAATGGAAAATCACGAAGAAAAGCAAATTGAAGTCGTGCATGACAAAGAAGAGGGGAATAAAACATTAAACGAAAGTGCACACAATAAAGTTCAATTTAAAAGATACCATATTAATGAAATTGAAGTAGCAACTAATTACTTTGACAATGACCTCAAAATTGGTGAAGGTGCATATGGACCTGTTTTTAAGGGAGTGCTTGATGACATTGATGTTGCTGTTAAGGCCCTGAGACCAGACATAACCCAAGGGGAGAAGCAGTTTCAACAAGAGGTTAATGTTTTGAGCACGATAAAACATCCAAACATGGTTAAACTTCTAGGTGCATGTCCAGAGTATGGATGTCTTGTGTATGAGTACATGGAAAATGGTAGTTTAGAAGATCGTCTTTTCCAAAAAGATAACACCCCAACAATTCAATGGAAAGTTCGATTCAAAATAGCATCAGAAATTGCAACCGGTCTTTTGTTCCTTCATCAGACAAAGCCTGAGCCTATTGTGCATCGTGACCTCAAACCAGCAAATATTTTGTTGGATAGTAACTACACAAGCAAGATCACTGATGTGGGTTTGGCGAGGCTAGTCCCTCCTAAAGTACCCAACAAAACCACTCAATACCATAAGACAACAACAGCTGGTACATTTTGCTACATCGATCCAGAGTATCAACAAACAGGACTATTGGGTGTAAAATCAGACATTTATTCATTGGGTGTAATGTTGCTGCAAATTATAACCGGAAAGCCTCCTATGGGTGTGGCTCACCTAGTTCAAGAGGCGATAAACAAAGATAGATTTTCAGAGGTTCTTGACCCAAATGTCACTGATTGGCCTGTGGAAGAGACTTTATCATATGCAAAGTTGGCTTTAAAGTGTTGTGAGATGAGAAAACGAGATAGACCAGACCTTTGTTCTGTCATTTTGCCAGAGTTGAATCGACTTAAAAACTTGGGAGAAGTAGCCACTAACATTGATTGA 1905 0.3953 MASNAGEGESTLIAIDIDRNSQHAVKWAVEHLLKNNSPCTLIHVTTKNLHPNDFEVFPKQGRPPTEEESQQFFLPFRGFCARKRVVVKELVLHDIDVSNALANFIVDNSINNVVLGASRSNSLIRKFKDVDLAASLVRSVPESCMVHVVSKGKVQNIRPVGHSQTISISPLKSLKGIRGSFRSKDLNRKSLKYKFWQGSNNDEVYAVTPHKTHGATTSPKPLDETHTIQNSPDQMTPISNENQFIVDKSDNHTRKSKFCKKSRATKTMQKEGNLEKDKLVEVPTLTLTEMEREKLETTVKSVEISKQMEVMENHEEKQIEVVHDKEEGNKTLNESAHNKVQFKRYHINEIEVATNYFDNDLKIGEGAYGPVFKGVLDDIDVAVKALRPDITQGEKQFQQEVNVLSTIKHPNMVKLLGACPEYGCLVYEYMENGSLEDRLFQKDNTPTIQWKVRFKIASEIATGLLFLHQTKPEPIVHRDLKPANILLDSNYTSKITDVGLARLVPPKVPNKTTQYHKTTTAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPMGVAHLVQEAINKDRFSEVLDPNVTDWPVEETLSYAKLALKCCEMRKRDRPDLCSVILPELNRLKNLGEVATNID 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00302 634 Pfam Protein kinase domain 360 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00302 634 SUPERFAMILY Protein kinase-like (PK-like) 336 615 IPR011009 -
Spst5g00302 634 SMART serkin_6 357 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00302 634 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 126 - -
Spst5g00302 634 CDD STK_N 13 152 - -
Spst5g00302 634 Gene3D HUPs 9 151 IPR014729 -
Spst5g00302 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Spst5g00302 634 Gene3D Transferase(Phosphotransferase) domain 1 430 631 - -
Spst5g00302 634 Pfam Universal stress protein family 12 148 IPR006016 -
Spst5g00302 634 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 329 429 - -
Spst5g00302 634 FunFam Os07g0541700 protein 430 521 - -
Spst5g00302 634 Gene3D Phosphorylase Kinase; domain 1 327 429 - -
Spst5g00302 634 PANTHER OS02G0152300 PROTEIN 12 628 - -
Spst5g00302 634 ProSiteProfiles Protein kinase domain profile. 357 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00302 Spst-Chr5 2606075 2609016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00302 292 628 Receptor kinase-like Gene Family AT5G12000 62.242 7.15e-155 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst5g00302 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00302 - - gmx:100814365 920.998