Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00301 ATGGCGTACCAGACCCCGGATAAAGATTCAGGATCCGATCCGAAGTCTCCAACGCGTCTCTATAACCCCTACAAGGACCTTGAAGTCCCCATTCGCAACCTCTACCAGCTCCCGACCTCCCCTGAGTATCTCTTCGTCGAGGAGGCTCGCCGCAAGCGTCGATCCTGGGGGGAGAACCTCACCTTTTACACCGGATGCGGCTACCTCGCCGGCGCCGTCGGTGGTGCCGCCTCTGGCCTCGTCGAGGGCGTCAAGTCCTTTGAATCCGGTGATACCACTAAGCTCCGAGTTAACCGCGTCCTCAACTCCTCCGGCCATGCCGGGCGCGCCTGGGGCAACCGCCTCGGCGTCATTGGCCTCCTCTACGCCGGCATCGAGAGCGGGATCGTAGCAGCGAGGGACACCGACGACGTCTGGAACAGCGTTGCGGCGGGACTGGGCACTGGCGCTCTGTATCGCGCCGCGAGAGGGGTACGGTCGGCGGCTGTCGCTGGTGCCGTTGGAGGCGTTGTGGTTGGAGTCGCTGTCACCGCGAAGCAGGCGTTGAAACGCTACGTGCCTATATGA 567 0.6314 MAYQTPDKDSGSDPKSPTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGAVGGAASGLVEGVKSFESGDTTKLRVNRVLNSSGHAGRAWGNRLGVIGLLYAGIESGIVAARDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00301 188 MobiDBLite consensus disorder prediction 1 21 - -
Spst5g00301 188 MobiDBLite consensus disorder prediction 1 17 - -
Spst5g00301 188 PANTHER TIM23 33 177 IPR045238 GO:0022857
Spst5g00301 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00301 Spst-Chr5 2604466 2605032 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00301 9 188 Chloroplast and Mitochondria Gene Families AT1G72750 71.038 6.65e-82 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00301 K17794 - gmx:100813158 310.842