Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00292 ATGGCACGGGGGAGGATCAGAGCAAGGCTCCGCAGGAGCCATCTTTACACATTTGGTTGCCTGAAGCCAACTACCACTGAGGAGGTGCCTCATCCACTTCAAGGTCCTGGCTACTCGCGAAGAGTGCTCTGCAACCAGCCTCAACTCCATGAAAAGAATTCTCTATTTTACTGCAAGAATGATATATCAACCACCAAATACAATGCCATCACGTTTCTGCCTAAGGCATTGTTTGAACAGTTTCGAAGGGTTGCTAACATATACTTCCTTTTGGCTGCTTGCCTTTCGGCTTCTCCAATTTCACCTTTCAGCCCCCTGAGCATGATTGCTCCTCTTGCATTTGTTGTGGGACTTAGTATGGTGAAGGAGGCATTGGAGGATTCTCGCAGGTTCCTTCAGGATATCAAAGTTAATCGACGGAAAGTTAGTCTCCATAAAGGCGATGGCACCTTTGGCTTAAGGTCGTGGCAGAAGATTATGGTTGGGGATGTGGTGAAAGTAGAAAAGGATCAATTTTTTCCAGCCGACTTGCTTCTCTTGGCGTCAAGTTATGAGGATGGAATATGCTACGTGGAGACAATGAATTTAGATGGGGAGACCAACTTGAAGGTGAAGAGATCTTTGGAGGCTACCATGTCTCTGGATAATGATGGGGCTTTCAAGGATTTCTCTGGAACAATATATTGTGAAGATCCAAATCCCAGTCTTTACACTTTTGTTGGGAACTTTGAGTATGAAAATCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTCAGAGATTCGAAGCTTAGGAACACTGATCATGTTTATGGAGTGGTCATTTTCACTGGACATGATAGCAAAGTCATGCAGAATTCTACAAAGTCCCCTTCAAAAAGAAGCACAATAGAAAAAAAGATGGATTATATCATATATACTCTTTTCACTGTCCTTATATTAATATCGTTTATTAGTTCAATAGGATTTGTTGCAAAGACCAAATACCAAGCCCCAACGTGGTGGTATTTACGTCCTGACGATATTGAATACCAGTTTGATCCTGAGAAAATTGGATTGGCTGGGATGAGCCATCTGATTACTGCACTCATTCTTTATGGATATTTGATACCCATCTCGCTTTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCAACCTTCATTGACCAAGACATTCAAATGTATGATGATGAAACTGGGACTCCAGCTGAAGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCTGATAAAACTGGCACTTTAACTTGCAACCAGATGGACTTTTTGAAGTGTTCCATTGCCGGTACTGCATATGGTGTTCGGTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTTCTGATCTTGACGATCAGGACTTGGAACAAAACATGGAGCAGGACTTGGATCTCTCTAATTTCCCCATGCATAAGGAGAGTAAAGTGCCATGGGAAAATATCGCTGAAGATGAAGAATCTGAACTTGGGATTGTTGTTAATTCCAGAGGTGATGAAGATCGAAGGCCTGCCATAAAGGGATTTGGTTTTGAAGATGATCGCCTTATGAATGGTAACTGGTTGAGAGAACCCAATGCTGATGTCCTTTTACTGTTTTTCCGGATATTAGCAGTTTGCCATACTGCCATCCCTGAACTAAATGAGGAGACTGACAGTTGTACATATGAGGCCGAATCACCTGATGAAGGGGCTTTTCTAGTAGCAGCTAGAGAATTTGGTTTTGAATTTTACAGGAGAACTCAATCAAGTGTTGTCATTCGTGAAAGTTTTTCTGCCGCAGGAAAAGTGGTTCAAAGAGAATATAAAATTTTGAATCTGCTGGATTTTACTAGCAAAAGAAAGCGCATGTCAGTTATTGTGCGTGATGAGGAGGGAAAGATCATTCTTTTCTGCAAAGGAGCTGACAGCATCATATTTGATCGACTGTCTAAGAACGGAAAAATGTATTTGGATGCTACTACTACACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTATAGAGAGCTTGATGACCGAGAGTACTCTGATTGGAATAACAAATTTCAGAAGGCCAAAACAGCTGTTGGGCCTGACAGAGAGGCAATGCTTGATCAGGTTTCAGATATTATGGAAAGAGAGTTGATACTTGTTGGGGCTACTGCTGTGGAGGATAAACTACAGAAAGGGGTGCCTCAATGCATTGACAAACTTGCTCAAGCTGGGCTAAAGATCTGGGTATTGACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGTAGTTTGCTTCGACCAGGCATGAAGCAAATCTGTATCACAATGAATTCAGATTCAGTAACTAATGATGGGAAAGAGGTCATTAAAGGAAACATCTTGACTCAAATCACCAATGCCTCGCAAATGATAAAGCTGGAAAAGGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTAACATATGCTTTAGAAGATGACGTCAAACTCCAATTTTTGGGACTGGCTGTTGGCTGTGCATCTGTTATTTGTTGTCGTGTGTCTCCAAAGCAAAAAGCATTGGTTACAAGGCTAGTGAAAGAAGGGACTGGGAAGACCACTTTAGCCATTGGTGATGGTGCTAATGATGTCGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTAATGGCTAGTGACTTTTCTATTGCCCAATTCCGTTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACCATATTCTATTTTGAGGCCTTTGCGGGCTTCTCTGGACAATCGGTCTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCTGTCATAACTCTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTGTATCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATCCTGGGATGGATGGGAAATGGTCTCTATTCCTCCCTCATAATCTTCTTCCTTGTTATTATCATCTTCTATGACCAAGCATTCCGTGCCAATGGCCAGGTCGCAGACATGGCTGCTGTTGGTACAACGATGTTCACTTGCATCATCTGGACTGTAAATTGCCAGATTGCACTGACAATGAGCCATTTCACATGGATTCAACACCTCTTTGTGTGGGGCAGCATAATCACTTGGTACCTCTTTCTCTTGTTATATGGCATGCTTCCACCAAAATATTGCAAGTCTGCCTACCAAATATTGGTTGAGGTTCTTGCTCCTGCTCCTATTTACTGGACAACAACCCTATTAGTAACAATCGCATGCGTTCTTCCTTATCTCGGCCACATATCCTTCCAAAGATGTTTTCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACATTGAAGATCAACGCATGTGGACGAGGGAGCGGTCTAAAGCAAGGCATGAAACGAAGATTGGATTCACGGCAAGAGTGGAAGCAAAGATTAGGAACTTTAAAGGTAAGTTGCAGAAGAAGCAGCAGTCTTCACAGGGGTCTTTGTCCCCATCATGA 3696 0.421 MARGRIRARLRRSHLYTFGCLKPTTTEEVPHPLQGPGYSRRVLCNQPQLHEKNSLFYCKNDISTTKYNAITFLPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMVKEALEDSRRFLQDIKVNRRKVSLHKGDGTFGLRSWQKIMVGDVVKVEKDQFFPADLLLLASSYEDGICYVETMNLDGETNLKVKRSLEATMSLDNDGAFKDFSGTIYCEDPNPSLYTFVGNFEYENQVYPLDPSQILLRDSKLRNTDHVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQAPTWWYLRPDDIEYQFDPEKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFIDQDIQMYDDETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMASDLDDQDLEQNMEQDLDLSNFPMHKESKVPWENIAEDEESELGIVVNSRGDEDRRPAIKGFGFEDDRLMNGNWLREPNADVLLLFFRILAVCHTAIPELNEETDSCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVIRESFSAAGKVVQREYKILNLLDFTSKRKRMSVIVRDEEGKIILFCKGADSIIFDRLSKNGKMYLDATTTHLNEYGEAGLRTLALAYRELDDREYSDWNNKFQKAKTAVGPDREAMLDQVSDIMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRPGMKQICITMNSDSVTNDGKEVIKGNILTQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDVKLQFLGLAVGCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYDDWYMILFNVVLTSLPVITLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFFLVIIIFYDQAFRANGQVADMAAVGTTMFTCIIWTVNCQIALTMSHFTWIQHLFVWGSIITWYLFLLLYGMLPPKYCKSAYQILVEVLAPAPIYWTTTLLVTIACVLPYLGHISFQRCFHPMDHHIIQEIKYYKKDIEDQRMWTRERSKARHETKIGFTARVEAKIRNFKGKLQKKQQSSQGSLSPS 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00292 1231 FunFam Phospholipid-transporting ATPase 731 927 - -
Spst5g00292 1231 CDD P-type_ATPase_APLT_Dnf-like 60 1040 - -
Spst5g00292 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 525 693 IPR023299 GO:0000166
Spst5g00292 1231 FunFam Phospholipid-transporting ATPase 598 729 - -
Spst5g00292 1231 NCBIfam HAD-IC family P-type ATPase 854 968 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst5g00292 1231 SFLD C1.7: P-type atpase like 404 938 - -
Spst5g00292 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 915 1165 IPR032630 -
Spst5g00292 1231 Pfam Cation transport ATPase (P-type) 553 658 - -
Spst5g00292 1231 NCBIfam phospholipid-translocating P-type ATPase 57 1173 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst5g00292 1231 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Spst5g00292 1231 PRINTS P-type cation-transporting ATPase superfamily signature 887 906 - -
Spst5g00292 1231 Pfam Phospholipid-translocating ATPase N-terminal 44 109 IPR032631 -
Spst5g00292 1231 Gene3D - 727 927 IPR023214 -
Spst5g00292 1231 Gene3D - 600 705 IPR023299 GO:0000166
Spst5g00292 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Spst5g00292 1231 FunFam Phospholipid-transporting ATPase 118 288 - -
Spst5g00292 1231 SUPERFAMILY HAD-like 410 931 IPR036412 -
Spst5g00292 1231 Gene3D - 432 460 IPR023299 GO:0000166
Spst5g00292 1231 SFLD p-type atpase 404 938 IPR044492 -
Spst5g00292 1231 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Spst5g00292 1231 Gene3D - 419 431 IPR023214 -
Spst5g00292 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 42 1191 - -
Spst5g00292 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1159 IPR023298 -
Spst5g00292 1231 Gene3D - 114 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00292 Spst-Chr5 2551339 2557219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00292 1 1230 Primary Pumps ATPases AT1G17500 73.808 0.0 1905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00292 K01530 - gmx:100778710 2231.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00292 5 2551339 2557219 Spst4g02224 4 62954296 62960251 PCT