Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00290 ATGGACCACCACAAAGAGCGAGTAAAGAGTGGGTGCCAGAAGATTTTGGAAGGAATAAATTCAATGTCTTTGGTAAATTTAGATGACCAACAAGTGCATTCTTTAGTGATGATGAGAGAAATAGCACGTGGGGTTGTTGATGATCGAGATAGAAAGGTGACTAAGAGTGATGTGATCACTGCCTTGCGCTGCAGCATTGAGAAAATGGTCTGTGCATCCAGGGATATCATTCAGATATTAAGTAGGATATCCTTTGATGGTGTGGATGACCAAAGGATGCATTTAGTCACGAGGATGAAGGAAATTGCTCATAGGATTATTGATAAACAACCTAGAGTTGCAATACCTAGGCCCGACTTGCTTGCTGAACAAGTTGGCTTTGTGGATGAAGGGATGCCAGATAGTCTCATCAAAGAGTCAACCAAGATTTGCAATAACGATGCCCTAATCGATGGGGCACTGAGCATGACTAATGAAGATGAAATGTTGGATGTAGGACATGTTTTAAGGTTTGAGAATGGAATAGATGAAATTCAGGAGTCTTTGTTACCGTGCTTTCAGCAATTTCTTATGTGGCCGCCTGATGATTGCGTCACCATAGGGTGGGTTCAGGACATGATGACCATCCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAATTCTGTCACGTTGTGCCGCCCCTTTTGGTGTACAACTTGGCAGACGCTGCTTGCAGGATTTTAAGTAAAGAACCAAACTGTGTGGAGATCAATGGCCAAGTAGAAGATTCAAGAGTAATTGTAGTGGGCGATATACACGGGCAGTTTCATGATTTAATGTTTATTTTCAAGCACGCAGGAGTGCCCTCTGAGAACCAGATTTATGTTTTTAATGGAAATTATGTAGATAAAGGAGCTTGGGGAATTGAAGTATTGATGCCTCACAGAGTATATCTACTTCGTGGAAATCATGAATCAAGATATTGCACTGCGAGATATGGTTTTAAGAAGGAGGTGTGGGCGAAATATGGTGATCAAGGTGAAGATGTCTACAATAAATTCCTAGAGTGTTTCAAGGAGCTTCCGTTAGCTTCAGTTATTGCAAACTGTGTTTATACTACACATGGAGGACTTTTCCGTAGTATACATGCAGCCCCCTCACAGAAACCAAAGCGGAATAAAATATGGAGGGTGGATCTTGGCTCTTTAGCCGAGTTATCTGAAGCGAATCGATCTTGTGTAGATTGTCCTTATGAAGGTCCTAACATTTTGTTGAGCGATGTTCTCTGGTCAGGACCATCTAACAGGTATGGCCTGAGGTATAATACAGGTGGTCAAAAGTTAGGTTTATTGTGGGGTCCTGATTGCACTGAGGCATTCTTAAAGCAGCACAATTTAAAGTCAGAGAACTTAATTGGCTGTCTTCCTATTGTTTTGGAGAATGAGCCTGGTCTATCACATGAAGGACCCGATGCAAGGGCTGGTAGAGATGATGATCTTGGGGATATGCTGTGTGGATACAGTATAGATCATGATGGAGAATCGGGGAAACTATGTACACTTTTTAGTGCTCCAGACTATCCACAGTTTGGTAAAAGGAGGTGTGATAATAAGGGAGCATATGCCGTATTGAAGTCACCTGATTTTGCGAGTCCTTCCTTTCACTCATTCAAAGGGACAGAAAGACCAATGGTGGATCCTTATGTTGATTTTGGTGCTAATAATTTGGACTCCAGTAAACTAGACTCTTCTCAAAGTGCCTCAACCTCTACCCTTTCTGCTTCTGAAAGATTTTATCCAGAAGGGATGAAACCCGAGTTTGACTTTGGGGCATTAGGCCTATACAATGCCCCATGTTGGAGTGTTGAGCTTCCTGATGGTTCAGGTGGTACTCAAGTTGTGGAGGTTCCTAGGGCATCAATAGTGGAAGGGTTGCCTCTGCCTCCTAACATACAGGAGCCACACAAGGCTGCTTATGAGTATTTGTTTGAGCTAGTGGCTGGCCTGAAACATATGATTGTAACAAGGGAGACTGAGAATAGGGCCCGTATGTCTGCTTTGAGAAGTAAAGCTAGGAAACGAAAGGCTTGTAAAGGCTGTTACCTCCTCCGGTAG 2097 0.4297 MDHHKERVKSGCQKILEGINSMSLVNLDDQQVHSLVMMREIARGVVDDRDRKVTKSDVITALRCSIEKMVCASRDIIQILSRISFDGVDDQRMHLVTRMKEIAHRIIDKQPRVAIPRPDLLAEQVGFVDEGMPDSLIKESTKICNNDALIDGALSMTNEDEMLDVGHVLRFENGIDEIQESLLPCFQQFLMWPPDDCVTIGWVQDMMTILEQASQKMLPSEFCHVVPPLLVYNLADAACRILSKEPNCVEINGQVEDSRVIVVGDIHGQFHDLMFIFKHAGVPSENQIYVFNGNYVDKGAWGIEVLMPHRVYLLRGNHESRYCTARYGFKKEVWAKYGDQGEDVYNKFLECFKELPLASVIANCVYTTHGGLFRSIHAAPSQKPKRNKIWRVDLGSLAELSEANRSCVDCPYEGPNILLSDVLWSGPSNRYGLRYNTGGQKLGLLWGPDCTEAFLKQHNLKSENLIGCLPIVLENEPGLSHEGPDARAGRDDDLGDMLCGYSIDHDGESGKLCTLFSAPDYPQFGKRRCDNKGAYAVLKSPDFASPSFHSFKGTERPMVDPYVDFGANNLDSSKLDSSQSASTSTLSASERFYPEGMKPEFDFGALGLYNAPCWSVELPDGSGGTQVVEVPRASIVEGLPLPPNIQEPHKAAYEYLFELVAGLKHMIVTRETENRARMSALRSKARKRKACKGCYLLR 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00290 698 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 685 - -
Spst5g00290 698 SUPERFAMILY Metallo-dependent phosphatases 221 561 IPR029052 -
Spst5g00290 698 ProSitePatterns Serine/threonine specific protein phosphatases signature. 314 319 IPR006186 GO:0016787
Spst5g00290 698 Gene3D - 198 591 IPR029052 -
Spst5g00290 698 PRINTS Serine/threonine phosphatase family signature 350 376 IPR006186 GO:0016787
Spst5g00290 698 PRINTS Serine/threonine phosphatase family signature 259 286 IPR006186 GO:0016787
Spst5g00290 698 PRINTS Serine/threonine phosphatase family signature 511 527 IPR006186 GO:0016787
Spst5g00290 698 SMART pp2a_7 226 555 IPR006186 GO:0016787
Spst5g00290 698 Pfam Calcineurin-like phosphoesterase 259 461 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00290 Spst-Chr5 2539817 2546581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00290 190 461 Calmodulin-binding Proteins AT5G63870 49.828 1.66e-85 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00290 K04460 - gmx:100779241 905.205