Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00287 ATGGGTGCTTCGGGAAAATGGTTCAAGTCATTTATTCCTTTTCGAAAGACCTCAACTTCAACAACTGATCAGGAGAAGGGTGGTGAAAACAAGAGCAAGAAGAAATGGAAACTATGGAGGGCTTCTTCAGAAGGGTCCACCGTGAAGAAAGTTGGCGATGCTACTCTGCCTGATTCTTCCTTTACTTATGCGGTGGCTGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCTGTGTTTCGAGCCTTTTTGGCTAGACGAGCTTTGAGGGCCCTGAGGGCAGTGGTAAGGCTACAAGCTATTTTTCGAGGCCGGCTAGTCAGAAAGCAAGCAGCTGTCACTCTGAGGTGTATGCAGGCTCTTGTTCGAGTTCAGGCGCGTGTGAGGGCAAGGAATGTGAGGAATTCTCCTGAAGGGAAAGCAGTGCAGAAATTACTTGATGAGCATCGCAACCTAGCTGATCCTTTTAAGCAGATTGAGCAAGGATGGTGTGACATTCCTGGAACCATGGATGAAGTTAAAGCCAAACTACGAATGAGGCAAGAAGGAGCTATCAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGTCAAGACTGATTGCCAGTCCAAATCCTAAAGCCACTAATGCATTGATCCCTCTCAAGCATCACAACCTAAGCAATAAGAGCTTAGGATGTAACCTGTTAGAACGCTGGATGGAGGCCAAGCCTTGGGAGAGTCCAATCTCCAGGAGGAGTGAAGACGTTGTTCCTGCTTTTCAATCAAGAAAGAATGGTGTGACAACTAGGATTTCAGCTTTTAAACCTCTTATAACCAGTCAATCCACTCCATCATCCTCGGCCATAAGCTCTGAATACATGTGTGATGATAGCCCTGCGTCAACTTCTTATTCAGCTGGATCTCCGTCTTTTACATCCACCAATACTGTTTTAGTGGAAGCAACAGAGGAAAGAGATGTTCATCAACCGAGCTACATGAATTTGACAGAATCAACCAAGGCTAAGCTGAAAACTTGCCGGAGTTCTTCTCAGAATTCAAAGAGTCTTGTAGTGGAGGAGTGTGTGTCTCACAGCACAACCACAGGTTGGATGATGAATGGAGATACTAGAAACAGTTCTAATTCTGACCCTTCAGTTAACTTAAGGAAGGATTATTGTGCAACACCTCTGAGGGCAAGTTATCAAAAACGACAAATTGGGATTTGA 1239 0.4544 MGASGKWFKSFIPFRKTSTSTTDQEKGGENKSKKKWKLWRASSEGSTVKKVGDATLPDSSFTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQKLLDEHRNLADPFKQIEQGWCDIPGTMDEVKAKLRMRQEGAIKRDRAMAYSLSTQSRLIASPNPKATNALIPLKHHNLSNKSLGCNLLERWMEAKPWESPISRRSEDVVPAFQSRKNGVTTRISAFKPLITSQSTPSSSAISSEYMCDDSPASTSYSAGSPSFTSTNTVLVEATEERDVHQPSYMNLTESTKAKLKTCRSSSQNSKSLVVEECVSHSTTTGWMMNGDTRNSSNSDPSVNLRKDYCATPLRASYQKRQIGI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00287 412 PANTHER IQ-DOMAIN 5-RELATED 1 374 - -
Spst5g00287 412 MobiDBLite consensus disorder prediction 17 37 - -
Spst5g00287 412 Pfam IQ calmodulin-binding motif 102 119 IPR000048 GO:0005515
Spst5g00287 412 Pfam IQ calmodulin-binding motif 80 99 IPR000048 GO:0005515
Spst5g00287 412 ProSiteProfiles IQ motif profile. 102 129 IPR000048 GO:0005515
Spst5g00287 412 ProSiteProfiles IQ motif profile. 78 106 IPR000048 GO:0005515
Spst5g00287 412 Gene3D - 77 120 - -
Spst5g00287 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 120 IPR027417 -
Spst5g00287 412 SMART iq_5 77 99 IPR000048 GO:0005515
Spst5g00287 412 SMART iq_5 100 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00287 Spst-Chr5 2517869 2519886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00287 1 394 IQD Protein Family AT2G26180 44.286 7.73e-86 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00287 - - gmx:100788715 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00287 5 2517869 2519886 Spst4g02232 4 63038202 63041192 PCT