Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00274 ATGGCAACCAACCAAGTAGAAGAAGCAGCGAAAAGGGTTCATTACCCATTGGACTCTTCCTCGTACAAGCTCCTCAACGAGATCGGCGCCGTCGTGAGCGCCGTCGTGTACAAAGCCCTCTGCATCCCCATGAACTCCGCCGCGGTGGCAATCAAATCCATAGACCTGGACCGTTCCCGCCCCGACTTGGACGATGTTCGTCGGGAGGCCAAAACCCTATCCCTCCTTTCTCACCCTAACATCCTCAAAGCACACTGCTCCTTCACCGTCGATCGCCGCCTCTGGGTGGTGATGCCCTTCATGGCCGCAGGGTCTCTCCAATCCATCATCTCTCACTGCCACCCCGACGGCTTAACCGAACCCTGCATCGCGGTGGTTCTCAGAGACACCCTCAACGCCCTCTCCTACCTACACGGCCAGGGCCACCTCCACCGAGACATAAAAGCCGGTAACGTCCTCGTCGACACAAACGGGCAAGTGAAGCTCGCAGATTTCGGCGTGTCGGCTTCGATCTACGAGTCCTCCACGTGTTCCTCTCTCAAGTTCACCGACGTTGCCGGCACGCCGTATTGGATGGCTCCTGAGGTGATTCACTCGCACACAGGGTACAGTTTCAAGGCTGATATATGGTCCTTCGGGATAACAGCTTTGGAGCTGGCGCATGGAAGGCCTCCTCTCTCTCACCTTCCACCTTCCAAAAAGGGGAATGGAAAGAAGTTCTCCAAGGCGTTCAAGGACATGGTGGCTTCTTGTCTAGACCAAGATCCTTCCAAAAGACCCACAGCTGATAAGTTGCTGAAACACCCCTTCTTTAAAAACTGTAAGGGAACTGATTTTCTGGTGAGGAACGTTCTCCAAGGGTTGCCCAGTGTGGAGAAAAGGTATAAGGATAACAAGGTTAATGAGCATGCAGATGAGGGGGAGCATGATGATGATGATGATGAAGAAGACCCTGCCATGCTGGTGAAGGAGAGAAGGATCAGCGGGTGGAACTTCAACCAAGACGGGTTGGAGCTTGATCCTGTGTTCCCAAACGATGATGCGGTGGCAAAAGAGGTTGCGTTTGGAAGGGAAGCGGGTACCCAACAAATGGGGGAGCATGTTTATGTTGGTGGTGGTGCAGCAGCAGCAAGCATAGCGGGTGGTGGTGGCGTGAAGAAGGAAAAGATGTTGGCGACTCTGAATGTGTTGAAAGGGAGCTTGGAACAAGAGCTGTTGGAAGTGAAGTTTCTGGTGAAAACGATACAAGGAGAAGAGGAGAGTGATCATCAAGTAGCTGCTGCTGCTGATCATGGTGAAGAGCACAAGGAGATTTCTAGGCTGAGGGCTGCACTGGAAAATGAGAGGAAGAAGAACTTGCAGTTGGAGTTGCAGCTTCACACTTGCAAGCTTCACCATTCTTCTGCTCTCAATGTTTCAAACTAA 1425 0.5242 MATNQVEEAAKRVHYPLDSSSYKLLNEIGAVVSAVVYKALCIPMNSAAVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHCHPDGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNVLVDTNGQVKLADFGVSASIYESSTCSSLKFTDVAGTPYWMAPEVIHSHTGYSFKADIWSFGITALELAHGRPPLSHLPPSKKGNGKKFSKAFKDMVASCLDQDPSKRPTADKLLKHPFFKNCKGTDFLVRNVLQGLPSVEKRYKDNKVNEHADEGEHDDDDDEEDPAMLVKERRISGWNFNQDGLELDPVFPNDDAVAKEVAFGREAGTQQMGEHVYVGGGAAAASIAGGGGVKKEKMLATLNVLKGSLEQELLEVKFLVKTIQGEEESDHQVAAAADHGEEHKEISRLRAALENERKKNLQLELQLHTCKLHHSSALNVSN 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00274 474 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 14 449 IPR047173 GO:0043539
Spst5g00274 474 Pfam Protein kinase domain 22 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00274 474 FunFam Serine/threonine-protein kinase BLUS1 11 100 - -
Spst5g00274 474 Coils Coil 428 458 - -
Spst5g00274 474 Gene3D Transferase(Phosphotransferase) domain 1 104 320 - -
Spst5g00274 474 Gene3D Phosphorylase Kinase; domain 1 10 100 - -
Spst5g00274 474 SUPERFAMILY Protein kinase-like (PK-like) 21 290 IPR011009 -
Spst5g00274 474 SMART serkin_6 22 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00274 474 MobiDBLite consensus disorder prediction 296 317 - -
Spst5g00274 474 ProSiteProfiles Protein kinase domain profile. 22 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00274 Spst-Chr5 2395646 2397108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00274 9 454 MAP Kinase Kinase Kinase Kinase AT4G14480 52.156 2.17e-165 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Spst5g00274 Pkinase 8.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00274 K08835 - gmx:100820227 703.36