Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00268 ATGGGATTGCAGCTTATTTTGCTGCTAGTTAAGCTACATTTTGTTATATGTACACCCCATCTTCATGAATATACTGGCACCAATTTGCACCATTTGAGAATCCGAAGCCCTGCAAGCATTGCATTCCCACCAACAGAATCACCTTCTGGAGGTCCTTCCAGTATTGCACTTCCACCTTCCAAGGCATCTTCTGGAATTCCCGGAATTATTGCACTTTCACCTTCCCAATCATTCCCCAAAAGAAAATGGGCGCACAGTTCTATGGGCACTCCAATACCACACCATAAGCATCACCATTCCAGAAGAAAGTCCAGCAACCACGTTCCTGGGCCAACCTATTCAATCAGCCCTCATACTCATCAAGCTCCTCCTCCAGTCTTCAAATCACAACATTCATTCTCTTCACCTATGAGCCGGGATTTACATGCACCCGCGCCAGCACCAACAGTTCTACCACACCACTTGAATGTGCCCTCTACTTCACCTAGAATTTCACCTCTAGGTTCATCAGTGAAGAAGACAAGTACTCCACCAGGAGCATATGCTATGGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCGGTGACATGCTCTGAGCCCTTGACATATACACCTCCAGGATCACCTTGTGGTTGTGTCTGGCCACTTCAAGTTAAACTTCGCATCAGCATTGCGATATACAAGTTTTTTCCTTTGGTTTCCAAGCTGACCAAAGAAATTGCAGCTAGTGTTTTGCTGAACCGTAATCAAGTACGCATTGTGGGAGCCGATGCAACTACCCAGCAGCTCGAGAAAACCACTGTTCTCATAAACCTGGTACCCCAAGGAGTGAAATTTGATGATACAACAGCCTTTTTAATATTTAAGAAATTCTGGCAGAGAGAAATTCTCAATGATGCTTCTGCCTTTGGTGCCTATGAAGTGCTCTATGTTCATTATCCAGGCCTTCCACCATCTCCACCTTCAAATGTTTACGTTGAACCATACCATGGTCAAGACAACAATGGAACAATAGTGAAACCTTTAGGAGTAGATGTCTCAAGGAAGCAAAAAGAAGGGAGTGGTGGAAGAATGGGTATTATGATCCTCCTGTCATCTTTTACCGCCTTCGTTCTATTCATTGGAGTTGCCTGGCTTTTTCTCTTGAAATGTGGTTCCTGCACTATTGAACCTGAACATATTCCAGATGCCAAAATTCCAACCTCTTCAAAGCTATCAGGTACTGCCAGTGCTAGGTCATTGATTTATGGGAGCATGCCAGGTTCTGAATCAATGTCCTTCAGTTCAGGAACAATAATCTATGCAGGATCAGCTAAAATATTTACTTTGAATGAAATTGAGAAAGCAACAAATAACTTCAATTCTTCAAGCATACTAGGAGAAGGTGGCTTTGGTCTTGTTTATAAAGGTGACCTACATGATGGCACAGATGTGGCAGTGAAGATTCTCAAAAGAGATGACCAGCATGGTGACCATGAATTCTTTGCAGAGTCAGATATGCTTAGCCGCTTGCACCATAGGAATTTAGTTAAATTGATAGGTACATGCACAGAGAAACAGACTCGCTGCTTAGTCTATGAGCTTGTCCCCAATGGCAGTGTGGAATCTCACTTACATGGTGTTGACAAGGAAACCGAACCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTAGGGGATTAGCTTATCTGCATGAAGATTGTAATCCATGTGTCATACATAGGGACTTCAAATCCAGTAACATCTTATTGGAAGATGATTTTACACCTAAAGTTTCGGATTTTGGATTGGCAAGAACAACACTGAACGAGGGAAACAAGCACATCTCAACGCATGTTATTGGAACATTTGGCTACGTAGCTCCTGAATATGCAATGACAGGACATCTTGTCGTCAAAAGTGATGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCCTAAGTGGAAGAAAGCCTGTGGATTTTTCACAGCCACCAGGTCAAGAAAACCTTGTTGCTTGGACTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGGAGATTATAGACCCAGTTATAAAGCCCAGTGTTTCTGTCGATACCATTGTAAAAGTTGCAGCAATTGCATCCATGTGCGTGCAACCAGAAGTCACTCAGCGTCCTTTTATGGGTGAAGTTGTTCAGGCCTTGACGCTGGTATGCAGTAAGTTTGAGGAAACATAA 2217 0.4335 MGLQLILLLVKLHFVICTPHLHEYTGTNLHHLRIRSPASIAFPPTESPSGGPSSIALPPSKASSGIPGIIALSPSQSFPKRKWAHSSMGTPIPHHKHHHSRRKSSNHVPGPTYSISPHTHQAPPPVFKSQHSFSSPMSRDLHAPAPAPTVLPHHLNVPSTSPRISPLGSSVKKTSTPPGAYAMVLPSPPPNKDCMSVTCSEPLTYTPPGSPCGCVWPLQVKLRISIAIYKFFPLVSKLTKEIAASVLLNRNQVRIVGADATTQQLEKTTVLINLVPQGVKFDDTTAFLIFKKFWQREILNDASAFGAYEVLYVHYPGLPPSPPSNVYVEPYHGQDNNGTIVKPLGVDVSRKQKEGSGGRMGIMILLSSFTAFVLFIGVAWLFLLKCGSCTIEPEHIPDAKIPTSSKLSGTASARSLIYGSMPGSESMSFSSGTIIYAGSAKIFTLNEIEKATNNFNSSSILGEGGFGLVYKGDLHDGTDVAVKILKRDDQHGDHEFFAESDMLSRLHHRNLVKLIGTCTEKQTRCLVYELVPNGSVESHLHGVDKETEPLDWNARMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEDDFTPKVSDFGLARTTLNEGNKHISTHVIGTFGYVAPEYAMTGHLVVKSDVYSYGVVLLELLSGRKPVDFSQPPGQENLVAWTRPLLTSKEGLQEIIDPVIKPSVSVDTIVKVAAIASMCVQPEVTQRPFMGEVVQALTLVCSKFEET 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00268 738 Gene3D Transferase(Phosphotransferase) domain 1 531 737 - -
Spst5g00268 738 MobiDBLite consensus disorder prediction 91 105 - -
Spst5g00268 738 Pfam Protein tyrosine and serine/threonine kinase 458 728 IPR001245 GO:0004672|GO:0006468
Spst5g00268 738 FunFam Receptor-like serine/threonine-protein kinase ALE2 531 738 - -
Spst5g00268 738 SUPERFAMILY Protein kinase-like (PK-like) 435 729 IPR011009 -
Spst5g00268 738 MobiDBLite consensus disorder prediction 42 60 - -
Spst5g00268 738 Gene3D Phosphorylase Kinase; domain 1 428 530 - -
Spst5g00268 738 MobiDBLite consensus disorder prediction 154 175 - -
Spst5g00268 738 MobiDBLite consensus disorder prediction 106 137 - -
Spst5g00268 738 PANTHER OS01G0750732 PROTEIN 186 734 - -
Spst5g00268 738 MobiDBLite consensus disorder prediction 40 60 - -
Spst5g00268 738 ProSitePatterns Protein kinases ATP-binding region signature. 461 483 IPR017441 GO:0005524
Spst5g00268 738 ProSiteProfiles Protein kinase domain profile. 455 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00268 738 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Spst5g00268 738 FunFam receptor-like serine/threonine-protein kinase ALE2 428 530 - -
Spst5g00268 738 MobiDBLite consensus disorder prediction 80 175 - -
Spst5g00268 738 CDD STKc_IRAK 461 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00268 Spst-Chr5 2346725 2351701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00268 96 737 Receptor kinase-like Gene Family AT5G56890 57.143 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Spst5g00268 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00268 - - gmx:100775318 1231.08