Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00248 ATGGAGCTTGACAAGGCAGTTTTTGTGGGACTGTTGGAACTGATGAGCCGAGAACAACAGAAGCGAGGGAAGCAAGAAAAAGGTTGTGATGGAGCTGAAAAGGTTATTGTTGCCGTCAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCCCTAACTCATGTTGTGCAACCGGGCGATTGCATTACACTGCTAGTGGTTGTACCTTCACAAAGTTCGGGCAGAAGATTATGGGTTTTTCCAAGATTTGCTGGCGATTGTGCCAGTGGTCATAAGAAATCTTCTTCAGGATCATCAGGTTCAGAACAGAAGAGTGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCTAACAAGATAAATGTGAAGATTAAAATTGTTTCTGGATCACCCTGCGGAGCAGTGGCTGCAGAAGCCAAGAAAGCCCAAGCCAGTTGGGTCGTTTTAGACAAACAGCTTAAACATGAGGAAAAACAATGTATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCTCAACCTAAGGTACTCCGCTTGAACTTGGTTGGGACCAAAAAAAAGGATCTTGAAGAATTATGTTCTCTACCTTCTGAACAAGATCAGATACTTGGAAAACAAACTAAGAACAAGGGTGATTCTTTAAATTCCTTAAAAGGTCCGGTTGTCACTCCATCTAGCAGCCCTGAGCTAGGGACACCTTTCACTGCTACGGAAGCTGGTACTTCATCGGTTTCAAGCTCCGATCAAGGAACTTCACCATTTTTCATCTCTGAGATGAACAGTGACTCAAAAAAAGAGGAAACTATCAAAGAAAATCCAGAACGTGGTGATTCTATATCAGACACAGACAGTGAAAACTTGTCCACATGTTCAGCAAGCTTGAGATTCCAGCCATGGATCACAGATTTACTTTTGCATCAACGGTCATCTCAACCGAAGGAAGAAAAAACGGAGAGGCCGCATAATAGGGTTCAATCATGTACTACTAGAGCTTTACTTGAAAAGTTCTCTAGACTTGATAGAGAAGCTGAAATTGAAAGCTCAACCTACAAGACTGACTTGGATTTCAGTGGAAATGTACGAGAAGCAATAGCATTATCTAGTAATACTCCACCTGGTCCACCTCCGTTGTGTTCAATCTGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCCCGATGGTTCAGCTATGCTGAATTGGAGCTTGCCACTGGTGGATTTTCGCACGCTAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTGCCAGATGGACAAGTCGTTGCTGTGAAGCAACATAAATTAGCCAGTTCTCAGGGTGATCTTGAATTCTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCAACGAAATGTTGTTATGTTGATTGGTTTCTGTATAGAGGATAAGAGAAGGCTATTGGTTTATGAGTACATATGTAATGGATCATTGGATTCTCACTTATATGGTAGACAACGAGAACCATTAGAATGGTCTGCCCGGCAAAAAATTGCTGTTGGAGCTGCCCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATCATCCACCGAGACATGCGGCCAAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGTGACACAGGAGTGGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATTACTGAAAAGGCTGATGTTTATTCTTTTGGTGTGGTATTAGTGGAACTTGTTACAGGGCGAAAGGCTGTGGATCTCACTAGGCCAAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCACTGTTAGAAGAATATGCCATCGAAGAACTAATTGATCCAAGGTTGGGAAGTCACTATTCGGAGCATGAGGTCTATTGCATGCTACATGCTGCTTCATTGTGCATAAGGAGAGATCCTTATTCTAGACCACGCATGTCACAGGTTCTGCGAATACTGGATGGCGACACGAAAGGACAGCGCCATAACAATAGTGGTCTCCCTAACAATAGTGGTCTCCCTGTTGTAAGAGTCACTGGAAGCTTTCATTGGGAAGCTCGGAGTTCAAGCCTTGCCTATTTGGAAAGCAACGGGTCTGTCTCAGTGGACAGACAACATGTGAAGAGACTACAGTTAAAACAGTTCACGAAGAAGATTGCTCACTCCTACCTCTTAGCTGCTTTCTGGCTCAAAGCTTCTTCTTTAGGTTTTGGAAGAGGCCATTCAGAGGACCTGATTATCCTTGTACCCCAGGATACTACAAAATGTTGGGATTCTTCTATTGACGCGAAATAA 2400 0.4392 MELDKAVFVGLLELMSREQQKRGKQEKGCDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWVFPRFAGDCASGHKKSSSGSSGSEQKSDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQASWVVLDKQLKHEEKQCMEELQCNIVVMKRSQPKVLRLNLVGTKKKDLEELCSLPSEQDQILGKQTKNKGDSLNSLKGPVVTPSSSPELGTPFTATEAGTSSVSSSDQGTSPFFISEMNSDSKKEETIKENPERGDSISDTDSENLSTCSASLRFQPWITDLLLHQRSSQPKEEKTERPHNRVQSCTTRALLEKFSRLDREAEIESSTYKTDLDFSGNVREAIALSSNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSHANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQQRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEHEVYCMLHAASLCIRRDPYSRPRMSQVLRILDGDTKGQRHNNSGLPNNSGLPVVRVTGSFHWEARSSSLAYLESNGSVSVDRQHVKRLQLKQFTKKIAHSYLLAAFWLKASSLGFGRGHSEDLIILVPQDTTKCWDSSIDAK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00248 799 MobiDBLite consensus disorder prediction 215 270 - -
Spst5g00248 799 MobiDBLite consensus disorder prediction 271 292 - -
Spst5g00248 799 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 390 493 - -
Spst5g00248 799 CDD STKc_IRAK 424 690 - -
Spst5g00248 799 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 494 696 - -
Spst5g00248 799 FunFam Dual-specific kinase DSK1-like 26 181 - -
Spst5g00248 799 PANTHER OS01G0750732 PROTEIN 169 696 - -
Spst5g00248 799 Pfam Protein tyrosine and serine/threonine kinase 422 687 IPR001245 GO:0004672|GO:0006468
Spst5g00248 799 ProSitePatterns Tyrosine protein kinases specific active-site signature. 539 551 IPR008266 GO:0004672|GO:0006468
Spst5g00248 799 Gene3D Phosphorylase Kinase; domain 1 390 493 - -
Spst5g00248 799 SUPERFAMILY Protein kinase-like (PK-like) 402 688 IPR011009 -
Spst5g00248 799 MobiDBLite consensus disorder prediction 215 297 - -
Spst5g00248 799 ProSiteProfiles Protein kinase domain profile. 418 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00248 799 Gene3D Transferase(Phosphotransferase) domain 1 494 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00248 Spst-Chr5 2246610 2252539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00248 398 689 Trihelix Transcription Factor Family AT1G70460 53.872 5.61e-100 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Spst5g00248 PK_Tyr_Ser-Thr 6.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00248 - - gmx:100789216 1258.43