Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00237 ATGTCGAGGAGTTTCCTTGTTGGTTTTGTTGGAGGTCTAGTTCTTGCCGTTCTGATTCAAGCTCAGGACCAATCAGGATTCATCAGCATAGATTGTGGAGCTCCTGCAGATGTGAGCTATACTGAGGCGAAAACAGGCATAAATTATACATCAGATGCAAAGTTAATCAATACTGGTGTGAGTATGTCAATAGAATCTAGTCTCAAAAATGAGTATCAACGACAGGTGCAGACTCTAAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGGGGCTCTAAGTATTTAATCAAGGCTACTTTTTTGTACGGAAATTATGATGGTCTAAATAAGGTACCACAGTTTGATCTTCTTTTTGGGGCTAACCGGTGGGGTACAGTGAACATAAACAATGGATCCCTTGACCTGACCAAGGAGATCATACATGTACCTTCACTGGATTATGTACAAATCTGTCTCGTTAACACAGGCCGTGGAACACCATTTATATCATCCATAGAACTGAGAAATTTGACAAATGATATTTATGTCACTGAATCTGGATCATTGAAAACTTACATCCGGTGGGATATAGGTTCAGACATCGGCTATAGGTACAAGGAAGATGTTTATGATCGTTACTGGGCCTATGACAACATCAATGAGTGGACACAATTAAGTGCTTCGATTTCTGCTGATGCTACAAACCAGAACATATATAAACCACCAGCTATTGTCATGAGCACTGCAGTTACACCAGCAAATGTTAGTGCTCCATTGGTAATAAGCTGGGTACCAGATGATCCAACCGATCAGTTCTATGTTTACATGTACTTCATGGAGATTGGAGTGTTAGCCACAAATCAGACAAGAGAATTCACCATCGTGAATAATGGTATACAATGGTATTCAAAGTTTTCACCCCAGCGTCTGAGTGTCAACACTTTATATAGCACTTCACCCTCCAGTGGGAAAGAAATTATATTTTCTATTGAAAAGACCAAAATCTCAACCCAACCTCCCATCATCAATGCTCTTGAAGTTTACAAAGCAATAGACTTCCCGCAATCAGATACATTCAAAGACGATGATGATGCCATTACAACCATCAAATCAATTTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGCGCCCCTGTAGACTACTTGTGGGCCGGTCTCAATTGTAGTTATATCGGAAAAGAGTCTCCAAGAATCACAACTTTGGATTTATCTTCAAGTGGATTGTCAGGGAAGATAGACCCTTCAATTTCAAACCTCGGCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTCAACGGAGAAATTCCTGATTTTCTGACTCAATTGCGACACTTAAAGATATTAAACTTGAAGAAGAATAACCTCTCTGGAACAATTCCCTCGGCACTTGTTGAAAGATATAACGAAGGTTCTCTGTCACTAAGTGTGGACCAAAATCCATATCTGTGTGAAACTGGTCAATGCAACAAGAATGAAAAGAAAAAGAATAGCTTTGTTACACCCTTAGTAGCATCAGTTAGTGGAGTTTTTATCGTTCTGCTGGTCGTGGCAGCAATATTCTGGACACGTAACAGGATAAAATCAAAAGGTGATGCTGCAACCATTAAAATTTTGATGAAAGAAAAGGATAAAAGTCAGATCTTACCGCAAGTCAAAGAACAAGATAATTCAATACTTCACTCCAAAAAGCAAAGATATTCATACCCTGATCTCCTTAACATCACCAACAATTTCAATACAATTATTGGTAATGGAGGATTCGGAACTGTTTATCTGGGTTATATCGATGACGCTCCAGTTGCGGTGAAAATGCTTTCCCCATCATCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTAATGAGAGTTCACCACAAAAATTTGACATCCCTTGTTGGTTATTGTAATGAAGGAAGTAATGAGGGTCTCATATATGAGTACATGGCTAATGGAAACTTACAAGAACATCTCTCTGGTAAACGCAGAAAAACAAAAATCTTAAGCTGGGAAGAGAGACTTCGTATAGCAGTGGATGCAGCCTCAGGATTGGAGTATCTTCAAAATGGTTGTAAGCCACCTATTTTCCACAGAGATGTAAAATCCACAAACATCTTGTTGAGCGAACACTTCCAAGCAAAATTATCTGATTTTGGTCTATCCAAAATTTTCCCAACAGACGGGGGAACTCATGTGTCAACTGTTATTGCTGGTACTCCTGGTTATCTGGATCCTGAGTACTACATAACCAGTAGATTAACAGAGAAGAGCGACGTTTATAGCTTTGGTGTGGTTCTTTTGGAGATAATCACAAGTCAACCAGTGATAGCTAAGAGTCAAGAAAAGACACACATAAGCCAATGGGTTAGTTCCTTGATTGAAAAAGGTGATATCAATGCCGTTGTTGACTCGAGGTTAGGAGGAGATTTTGATAAAAACTCAGTTTGGAAAGCAGTAGAAATAGCAACAGCATGTGTGTCTCTAAATCCCAACAGAAGGCCAGTCATAAGTGTGATAGTGACTGAACTGAAGGAGGCTTTAGCAATGGAATTTGGTCGAACTAAATATAGTGATGCCGAAACAAGCGATTCAGTTAAACTGGTCACCATAAATATGAATAGTGAACCCTTTCCCATGGCACGGTAA 2676 0.3939 MSRSFLVGFVGGLVLAVLIQAQDQSGFISIDCGAPADVSYTEAKTGINYTSDAKLINTGVSMSIESSLKNEYQRQVQTLRSFPEGKRNCYKINITRGSKYLIKATFLYGNYDGLNKVPQFDLLFGANRWGTVNINNGSLDLTKEIIHVPSLDYVQICLVNTGRGTPFISSIELRNLTNDIYVTESGSLKTYIRWDIGSDIGYRYKEDVYDRYWAYDNINEWTQLSASISADATNQNIYKPPAIVMSTAVTPANVSAPLVISWVPDDPTDQFYVYMYFMEIGVLATNQTREFTIVNNGIQWYSKFSPQRLSVNTLYSTSPSSGKEIIFSIEKTKISTQPPIINALEVYKAIDFPQSDTFKDDDDAITTIKSIYGVTRDWQGDPCAPVDYLWAGLNCSYIGKESPRITTLDLSSSGLSGKIDPSISNLGMLEKLDLSNNSFNGEIPDFLTQLRHLKILNLKKNNLSGTIPSALVERYNEGSLSLSVDQNPYLCETGQCNKNEKKKNSFVTPLVASVSGVFIVLLVVAAIFWTRNRIKSKGDAATIKILMKEKDKSQILPQVKEQDNSILHSKKQRYSYPDLLNITNNFNTIIGNGGFGTVYLGYIDDAPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKNLTSLVGYCNEGSNEGLIYEYMANGNLQEHLSGKRRKTKILSWEERLRIAVDAASGLEYLQNGCKPPIFHRDVKSTNILLSEHFQAKLSDFGLSKIFPTDGGTHVSTVIAGTPGYLDPEYYITSRLTEKSDVYSFGVVLLEIITSQPVIAKSQEKTHISQWVSSLIEKGDINAVVDSRLGGDFDKNSVWKAVEIATACVSLNPNRRPVISVIVTELKEALAMEFGRTKYSDAETSDSVKLVTINMNSEPFPMAR 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00237 891 FunFam Leucine-rich repeat receptor-like kinase 363 493 - -
Spst5g00237 891 ProSiteProfiles Protein kinase domain profile. 584 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00237 891 Pfam Malectin-like domain 30 348 IPR024788 -
Spst5g00237 891 Pfam Protein tyrosine and serine/threonine kinase 586 853 IPR001245 GO:0004672|GO:0006468
Spst5g00237 891 SUPERFAMILY Protein kinase-like (PK-like) 564 851 IPR011009 -
Spst5g00237 891 SMART serkin_6 584 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00237 891 PANTHER OS07G0107800 PROTEIN-RELATED 28 857 - -
Spst5g00237 891 Gene3D Ribonuclease Inhibitor 364 483 IPR032675 -
Spst5g00237 891 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 659 866 - -
Spst5g00237 891 CDD STKc_IRAK 590 855 - -
Spst5g00237 891 Gene3D Transferase(Phosphotransferase) domain 1 659 876 - -
Spst5g00237 891 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Spst5g00237 891 Gene3D Phosphorylase Kinase; domain 1 556 658 - -
Spst5g00237 891 SUPERFAMILY L domain-like 367 471 - -
Spst5g00237 891 ProSitePatterns Protein kinases ATP-binding region signature. 590 611 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00237 Spst-Chr5 2130679 2138203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00237 1 891 Receptor kinase-like Gene Family AT1G51800 47.072 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst5g00237 Malectin_like 1.2e-114 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00237 - - gmx:100818475 1254.58