Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00236 ATGGCTCTCAAATATTTGCCATCCTACACAATGTCGATGAGTTTCTTGGTTGTTTTTCTAGGTGGTCTACGTGTTCAAGCCCAGGATCAATCAGGATTTATCAGCATAGATTGCGGAGCTCCAGCGGATGTGAACTACACTGAGCCAAAAACAGGCATAAATTACATTTCAGATGCCAATTTCGTAAACACGGGTGTGAGTGGGACAATAATACCTGAAACCATCAACACTGTCTATCAACGACAGATGATGAATGTGAGAAGCTTCCCAGAAGGAAAAAGGAACTGCTACAGAATAAACATCACAAGAGGTTCCACTTATCTCATCCGGACTAACTTTTTGTATGGAAATTATGATGGGCTGAATAGGGCACCACAGTTTGATATTCATCTCGGGGTTAACCGGTGGTATACAGTGAATATAGGCAATGCATCTACTCCCCAAGTTAACGAGATCATACATGTACCTTCACTGGATTACCTGCATATTTGTCTGGTTGACACAGGTCATGGGACACCCTTTATATCAGCTATAGAATTGAGGACTTTGAAAAGTGATACATACGTCACTCAATTTGGTTCATTGGAATATCATAACCGATGGGATTTAGGTTCAAACAACAGCTACAGGTACGATGTTGATGTTTATGATCGTTTCTGGTATAGCTATGGCGACAACAAAGATTGGAAACAAATAAGTGCTTCTATTGCTGCTGATTCTTTTGATCAGAATCATTACAAACCGCCAGAAATTGTCTTGAGCACCGCAGTTACACCAGTAAATGCCACTGCTCCATTGGTAATAAGCTGGGAGCCACAAAATCCAACTGAGCTATACTATGTTTACATGCACTTCACCGAGATTGAAGTGTTACCGAAGAACCAGACAAGAGAGTTCAATATCACCCAGAATGGAAAGCCATGGTATCAAAATTTGTCTCCAATGCACCAGAGTATAAACACTATATATAGCAGGTCAGGCATCAATGGGGAAAAAATTGAATATTCACTTGAGAAAACCAAGAATTCAAGCCTTCCTCCCATCATAAATGCCATTGAAATTTACAAAGTAATAAACTTCCACCAGACAGACACACACCAAGGAGATGTTGATGCTCTTACAACCATCAAGTCTGTTTATGGAGTGACAAGAGATTGGCAGGGTGATCCATGCGCTCCTGTAGCCTACTCGTGGGATGGTCTCAATTGTAGTTATCGCGGGACTGAGAACCCAAGAATCACAAGTTTGAATTTATCTTCAAGTGAATTGTCAGGAACGATAGATCCTACGATTGCAAATCTCATCATGTTGGAGAAGTTGGATTTATCAAACAATAACTTATACGGCGAAGTTCCTGATTTTCTATCAAGATTACAACACTTGAAGATGATAAATTTAGAGAACAACAACCTAACTGGTTCAATTCCCTCAGCACTAGTTCAAAAATCTAAGGAAGGTTTCCTATCACTAAGTGTGGGCCAAAATCCATATCTATGCGAATCCGGTCAATGCAACGAGAAGAGAAAGAACAAGAAGAACATTGTTACTCTGTTATTAGCATCAGTTTGCGGGGGTTTGATCCTTCTGGTGGCTGTGGCAGCTGTATCGTGGACTCTCATAAAGAGAAAACCTAATGATTTGACGGTAGATCAACGTGAGATGACACCGCAATGCACAGAACAAGATGATTCATTGCACCAATTCAAAAAACAACTATATTCATACAGTGATGTAGTTAGAATCACCAACAATTTCAATACAATTGTTGGTAAAGGTGGGTTTGGAACAGTTTATCTAGGTTATATTGGTGACACTCCCGTGGCAGTGAAAATGCTTTCTCCATCTTCAGTTCGTGGATATCAACAATTTCAAGCAGAAGTTAAACTTCTAATGAGAGTTCATCATACAAATCTCACCTCGCTTGTTGGTTATTGTAATGACAGAGATTATAAGGGTCTCATATATGAGTACATGGCTAACGGGGACTTACAAGAACATCTGTCTGGTAAACACAACAAATCAAAATTCTTGAACTGGGAAGACAGACTTCGTATAGCTGTGGATGCAGCCCTAGGATTGGAGTATCTTCAAACTGGTTGCAAGCCTCCTATAATCCATAGAGACGTAAAATCTACAAACATCTTGTTAGATGAAAAGTTCCAAGCAAAATTATCTGATTTCGGTCTATCCAAAATTTTCCCAATTGATGAGGAAACTCATGTGTCAACTGTTGTTGCTGGAACTCCTGGGTATCTAGACCCTGATTACTACATATCCAATAGATTAACACATAAAAGCGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATAATCACTAGTCAACCAGTAATAGCAAGGAATGAAGAAAGGACACACATCATTCAATGGGTTGGATCACTGATTGCAAACGGGGATATCAATGCGATTGTTGACTCAAGGTTAGAAGGAGATTTTGACATTAATTCAGCTTGGAAAGCCGTAGAAATAGCAATGGCATGTGTTTCCTTGAATCCCAGTGAAAGACCAATGATGAGGATGATAGTGACTGAACTAAAGGAAACTTTAGCAACCGAATTAACTCGAACTAAACTCATTGATCCCGATATAAGAAGAGATTCAGTTGAACCTGTCACCTTCAATCTGGATACTGAACTCACTCCCCTGGCGAGCATAGTCCCACCTGAGCTTGCCACTGGGCATATGAATATGAGCAAGATGGGATATACCCTCTAG 2736 0.3995 MALKYLPSYTMSMSFLVVFLGGLRVQAQDQSGFISIDCGAPADVNYTEPKTGINYISDANFVNTGVSGTIIPETINTVYQRQMMNVRSFPEGKRNCYRINITRGSTYLIRTNFLYGNYDGLNRAPQFDIHLGVNRWYTVNIGNASTPQVNEIIHVPSLDYLHICLVDTGHGTPFISAIELRTLKSDTYVTQFGSLEYHNRWDLGSNNSYRYDVDVYDRFWYSYGDNKDWKQISASIAADSFDQNHYKPPEIVLSTAVTPVNATAPLVISWEPQNPTELYYVYMHFTEIEVLPKNQTREFNITQNGKPWYQNLSPMHQSINTIYSRSGINGEKIEYSLEKTKNSSLPPIINAIEIYKVINFHQTDTHQGDVDALTTIKSVYGVTRDWQGDPCAPVAYSWDGLNCSYRGTENPRITSLNLSSSELSGTIDPTIANLIMLEKLDLSNNNLYGEVPDFLSRLQHLKMINLENNNLTGSIPSALVQKSKEGFLSLSVGQNPYLCESGQCNEKRKNKKNIVTLLLASVCGGLILLVAVAAVSWTLIKRKPNDLTVDQREMTPQCTEQDDSLHQFKKQLYSYSDVVRITNNFNTIVGKGGFGTVYLGYIGDTPVAVKMLSPSSVRGYQQFQAEVKLLMRVHHTNLTSLVGYCNDRDYKGLIYEYMANGDLQEHLSGKHNKSKFLNWEDRLRIAVDAALGLEYLQTGCKPPIIHRDVKSTNILLDEKFQAKLSDFGLSKIFPIDEETHVSTVVAGTPGYLDPDYYISNRLTHKSDVYSFGVVLLEIITSQPVIARNEERTHIIQWVGSLIANGDINAIVDSRLEGDFDINSAWKAVEIAMACVSLNPSERPMMRMIVTELKETLATELTRTKLIDPDIRRDSVEPVTFNLDTELTPLASIVPPELATGHMNMSKMGYTL 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00236 911 Pfam Malectin-like domain 36 357 IPR024788 -
Spst5g00236 911 CDD STKc_IRAK 589 854 - -
Spst5g00236 911 SUPERFAMILY L domain-like 365 480 - -
Spst5g00236 911 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 658 865 - -
Spst5g00236 911 ProSiteProfiles Protein kinase domain profile. 583 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00236 911 SMART serkin_6 583 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00236 911 Gene3D - 197 358 - -
Spst5g00236 911 Gene3D Ribonuclease Inhibitor 370 487 IPR032675 -
Spst5g00236 911 PANTHER OS07G0107800 PROTEIN-RELATED 34 856 - -
Spst5g00236 911 Gene3D Transferase(Phosphotransferase) domain 1 658 871 - -
Spst5g00236 911 Gene3D Phosphorylase Kinase; domain 1 566 657 - -
Spst5g00236 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 704 716 IPR008271 GO:0004672|GO:0006468
Spst5g00236 911 Pfam Protein tyrosine and serine/threonine kinase 586 852 IPR001245 GO:0004672|GO:0006468
Spst5g00236 911 FunFam Leucine-rich repeat receptor-like kinase 368 500 - -
Spst5g00236 911 ProSitePatterns Protein kinases ATP-binding region signature. 589 610 IPR017441 GO:0005524
Spst5g00236 911 SUPERFAMILY Protein kinase-like (PK-like) 564 852 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00236 Spst-Chr5 2124434 2128955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00236 13 890 Receptor kinase-like Gene Family AT1G51800 49.055 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst5g00236 Malectin_like 1.3e-117 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00236 - - gmx:100795183 1473.37