Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00235 ATGTTAAATGCTTTTCTTCATAACTTCATAAGCATAATTAAACTACTCTCCCTCTTCGTCCATATCCACCAAAAACAAGTACCTGGGAGGGACATCATTGTTGCTCCTCAGAAACACCATCCCAAGGAAATACGAGGTAAAAGTTACAACATGGGGCTCTTGTATCTGTCATCGTACAGAATGTCGATGACTTTCTTCATTGCTTTTCTAGGTGGTCTACTTATTCAAGCTCAGGACCAAACAGAATTCATCAGCATAGATTGCGGAGCTCCTGCAGATGTAAAATATACTGAGCCAAACACAGGCATAGTTTATACTTCAGATGCAAATTTCATAACTGGTGTGAGTAAGTCAATATCATCTGATTTGAAAGATAAGCTTTACAGACCGCTGTGGACTGTCAGAAGCTTCCCTGAAGGAAAAAGGAACTGCTACAAAATAAATATCACAAGAGACTCTAAGTATCTTATCCGGACTATTGTTTTGTACGGAAATTATGATGGGTTGAATAAGACATCGCAGTTTGATATTCATCTTGGGGCTAACCTGTGGGATACAGTGACTTTATACAATGCTTCTAGTTACCAAATCAATGAGATCATACATGTACCTTCACTCGATTATGTACAAATCTGTCTGGTTGACACAGGCCATGGGACACCATTTATATCAGTTATAGAACTGAGGCCTTTGCCAAATAATATTTATGTCACTCAATTTGGATCATTGCAAACACACTACCGGTGGGATTTTGGTTCAAACCGAAGCTACAGGTACAAGGATGATATTTATGATCGTTTCTGGTATGACAAATTTGGCGACAGCAAAGATTGGACACACTTAGGTGTTTCTATTCCTGCTGAGTCTTTAATCCAATCTGTTTACCAACCGCCCGCCATTGTCATGAGCACCGCAGTCACACCAGTAAATGCTAGTGCTCCATTGGTAATAAGCTGGGAGCCACAAAATGAAACTGATATATACTATGTTTACATGCATTTCTGCGAGATTGAAGCATTAGCGAAGAATCAGACGAGAGAATTCACCATCAGACTAAATGGAAAAACATGGTATCCAAGATTATCTCCAATGTTCCAGGCTGTTAACACTATTATTCAGACCCTGTCAGGCATCAGCGGAAATAAACATATTTTCTCACTTGAGATGACCAAGAATTCAACCCTACCTCCCATCATTAATGCCATTGAAATTTACAGATTAAAAGACTTTCAGCAGTCAGATACGTACCAGGGAGATGTTGATGCTATTACAACCATCAAGTCAGTTTATGGGGTGAAAAGAGATTGGCAAGGTGATCCATGTGCACCTGCAGTTTTCTTGTGGGATGGTCTGAATTGTTCTTATGGCGACAATGAGTTCCCAAGAATCACAACTTTGAATTTATCTTCAAGCGGATTATCAGGAAAGATAGACCTTTCCATTTCAAAGCTCGCCATGTTGGAGAAGCTGGATTTATCAAACAATAGCTTAAACCACGAGGTTCCTGATTTTCTGTCTGAATTACAACACTTGAAGATCTTAAACTTGGAGAAGAATAACCTCTCCGGTTCAATTCCCTCCGCACTTGTTGAAAAATCTAAGGAAGGTTCTCTCATCCTAAGGTTGGGCCAAAATGCATATCTCTGTGAACATGGTCAATGCAACGAGAATAGAAATAACATTGCTGTGCCGTTGGTAGCATCAATCTGCGGGGTTTTGATCCTCCTGGTGGCCGTGGCAGCTATAGTGTGGATCCTTACAAGGAGAAAATCAAGAGCTTGGATGGTAGAAACGGATCAAAGTGGAATCTCCCTCCAGTACAGAAGGCAAGATGATTCATTACTGCAGTATAAGAAACAAATATATTCATACTCTGATGTCATTAAAATTACCAACAATTTCAACACAATTTTGGGCAAAGGAGGATTTGGAATAGTTTATCTGGGCTATATTTATGACACTCCAGTAGCAGTAAAAATTCTTTCCCCTTCATCGTTTCGTGGCTATGAACAATTTCAAGCAGAGGTTAAACTTCTAATGAGAGTTCATCATAAAAATTTGACTTCACTTATTGGTTATTGCAATGAAGGAACCAATATGAGTCTCATATATGAGTACATGGCTAATGGAAACTTACTGGAACATCTCTCTGGTAAGCACAGTAAATCAAAATTCTTGAGCTGGGAAGACAGACTGCGTATAGCAGTGGATGCAGCCTTGGGATTGGAGTATCTGCAAAATGGTTGCAAGCCCCCTATAATACACAGAGACATAAAATCTACTAACATCTTGTTGAATGAACACTTCCAAGCGAAATTATCTGATTTTGGTCTATCCAAAGTTATCCCAAGTGACGGAGGATCACATGTGTCAACTGTTGTCGCTGGTACTCCTGGTTACCTGGACCCCGACTATTACGCCTCCAATAGATTAACAGAGAAAAGTGATGTTTATAGTTTTGGAGTGGTTCTTTTGGAAATAATCACAGGTCAGCAAGTAATACTAAGGAATGAAGAAAAAATTCACATCATTGAATGCGTTACATCCCTGATTGCCACGGGGGATATCAAGGCCATTGTTGACTCGAGGTTAGAGGGAGATTTTGACATAAACTCAGCCTGGAAAGCCGTGGAAATAGCAATGGCTTGTGTTTCAGTAAGTCCCAACGAAAGGCCAGTTATGAGTGTGATAGTGTTTGAACTAAAGGAGACTTTAGCGGCCGAAATAGCTCGAACAAAACATAACAGTGCTGCAAATTCAGTTGAACCTGTCAATGTGAATCTGAGCTCTGAACTCATTCCTCTGGCTAGGTCGAAGAAACAGGAGGCAGAAGATCTGGAGCAGAAGTTCAGATCATATCATCACTGCATGGTTGCTTTTCTAGCTGCTCTACTTATTGAAGCTCATGGTCAACCAGGATTCACGAGCATAGATTGCGGAGCTCCTGCAGGCAATGGAACACCATTTATAACAGCTATAGAATTGAGGATTTTGAACAATGATACATATGTCACTCTGTTTGGATCACTGAAACGTTACAATTACTGGCGGTGTGATTTAGGTTCAAACCAATCCTACAGGTACTGGGCTGATCGTTATGATCGTTTCTGGTTCACCTGTACCTGGAGAAATTGGAAACCACTAAATTCTTCAATTTCTGATTATTCTTTGCACCAGAACGATTATCAACCGGGAGCTCTTGTCATGAGCACCGCAGTTACACCACCAAATGACAGTGATCCATTAGTAATAAGCTGGGAGCCAGAAGATGAAAATGAGCAATTCTATGTTTACTTGCATTTCACGGAGCTTCTAGAGTTAGCAACGAATCAGACAAGACAATTCAACATCATGTTGAATGGTGAATCATGGTTTCGAAATTTTTCTCCACGGTACCTGGGTCTTGACACTTTATATACCAAATCAGCCATCAGTGGGGAAGAAATTATATATTCAATGGAGATGACTGAAAATTCAACCCTGCCTCCCATCATCAGTGCCTTAGAAATTTACACTGTAATAGACTTACAGCAACCACAAACATTCCAAGGAGATGTTGATGCGATTACAACCATCAAGTCAATTTATAAGGTGACAAAAGATTGGCAAGGTGATCCATGCGCCCCTGTAGAGTACTTGTGGGATGGTCTCAATTGTAGTTATGGTTCAAATGAATCCCCAAGAATCACGGCTTTGGATTTATCTTCAAGTGGATTGTCAGGAACGATAGATCCTTCAATATCAATGCTCACCATGTTGGAGAAGTTGGATTTATCAAACAACAACTTAAATGGTGAAGTTCCTGATTTTCTAGTTCATTTACAACACTTGAAGATCTTAAACTTGGAGAAGAATGACCTCTCCGGTTCAATTCCCTCAGCACTTGTTGAAAAAGCCAAGGAAGGTTCTCTCTCACTGAGTGATCTCCATGCTAGTGTGGGTCAAAATCCAAATCACTGTGAATCTGGTCAATGCAACGAGAGGAAAATGAACAAGATTTTTACGCCCATAGTAGCATCAATTGGAGGATTTGGAACAGTTTACCTGGGCTATATCGCTGACATTCCAGTTGCAGTGAAAATGCTTTCCCCATCTGCAGTTCTTGGTTACCAACAATTTCAAGCAGAGGTTAAACTTCTACTCAGAGTTCATCACAAAAATTTGACATCCCTTATTGGTTATTGTAACGAAGAAACCAATAAGGGTCTCATATACGAGTACATGGCTAACGGGAACTTACGAGAACATCTCTCAGGTACACACAAAGAATCAAAGTTCTTGAGCTGGGAGGCCAGACTTCGTATAGCAGTGGATGCAGCCTTAGGATTGGATTATCTGCAAAATGGTTGCAAGCCTCCTATAATCCACAGAGATGTAAAATCTACAAACATCTTGTTGGATGAACATTTCCAAGCAAAATTATCTGATTTCGGTCTATCCAAAATTCTCCCAACTGAAGGGGGTTCTCATGTGTCAACTGTTGTTGCTGGTACTCTTGGTTATCTGGACCCTCACTACCACGGTTCCAACAGATTAACAAAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATAATCACAAATCAACCAGTAATGGAAGGGAGTGGAGAAAAGGGTCACATAAGTGAACGTGTTAGCTCCATGATTGCACAAGGGGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGAAAATTTTGACATTAACTCGGCATGGAAAGCTGTAGAAATAGCATTGGCTTGCGTTTCTCCAAATACCAACGAAAGGCCAATCATGAGTTTAGTAGTGCTTGATCTAAAGGAGTCTTTAGCGACCGAATTAGCTAGGAGAAAGCATAATGGTGCTGCTGATCCTAGGTATTCAGTTTCACCGGTCAGCGTGAATCTAGACAGCGAATCCATGCCCTCGGCTAGGTAA 4926 0.4048 MLNAFLHNFISIIKLLSLFVHIHQKQVPGRDIIVAPQKHHPKEIRGKSYNMGLLYLSSYRMSMTFFIAFLGGLLIQAQDQTEFISIDCGAPADVKYTEPNTGIVYTSDANFITGVSKSISSDLKDKLYRPLWTVRSFPEGKRNCYKINITRDSKYLIRTIVLYGNYDGLNKTSQFDIHLGANLWDTVTLYNASSYQINEIIHVPSLDYVQICLVDTGHGTPFISVIELRPLPNNIYVTQFGSLQTHYRWDFGSNRSYRYKDDIYDRFWYDKFGDSKDWTHLGVSIPAESLIQSVYQPPAIVMSTAVTPVNASAPLVISWEPQNETDIYYVYMHFCEIEALAKNQTREFTIRLNGKTWYPRLSPMFQAVNTIIQTLSGISGNKHIFSLEMTKNSTLPPIINAIEIYRLKDFQQSDTYQGDVDAITTIKSVYGVKRDWQGDPCAPAVFLWDGLNCSYGDNEFPRITTLNLSSSGLSGKIDLSISKLAMLEKLDLSNNSLNHEVPDFLSELQHLKILNLEKNNLSGSIPSALVEKSKEGSLILRLGQNAYLCEHGQCNENRNNIAVPLVASICGVLILLVAVAAIVWILTRRKSRAWMVETDQSGISLQYRRQDDSLLQYKKQIYSYSDVIKITNNFNTILGKGGFGIVYLGYIYDTPVAVKILSPSSFRGYEQFQAEVKLLMRVHHKNLTSLIGYCNEGTNMSLIYEYMANGNLLEHLSGKHSKSKFLSWEDRLRIAVDAALGLEYLQNGCKPPIIHRDIKSTNILLNEHFQAKLSDFGLSKVIPSDGGSHVSTVVAGTPGYLDPDYYASNRLTEKSDVYSFGVVLLEIITGQQVILRNEEKIHIIECVTSLIATGDIKAIVDSRLEGDFDINSAWKAVEIAMACVSVSPNERPVMSVIVFELKETLAAEIARTKHNSAANSVEPVNVNLSSELIPLARSKKQEAEDLEQKFRSYHHCMVAFLAALLIEAHGQPGFTSIDCGAPAGNGTPFITAIELRILNNDTYVTLFGSLKRYNYWRCDLGSNQSYRYWADRYDRFWFTCTWRNWKPLNSSISDYSLHQNDYQPGALVMSTAVTPPNDSDPLVISWEPEDENEQFYVYLHFTELLELATNQTRQFNIMLNGESWFRNFSPRYLGLDTLYTKSAISGEEIIYSMEMTENSTLPPIISALEIYTVIDLQQPQTFQGDVDAITTIKSIYKVTKDWQGDPCAPVEYLWDGLNCSYGSNESPRITALDLSSSGLSGTIDPSISMLTMLEKLDLSNNNLNGEVPDFLVHLQHLKILNLEKNDLSGSIPSALVEKAKEGSLSLSDLHASVGQNPNHCESGQCNERKMNKIFTPIVASIGGFGTVYLGYIADIPVAVKMLSPSAVLGYQQFQAEVKLLLRVHHKNLTSLIGYCNEETNKGLIYEYMANGNLREHLSGTHKESKFLSWEARLRIAVDAALGLDYLQNGCKPPIIHRDVKSTNILLDEHFQAKLSDFGLSKILPTEGGSHVSTVVAGTLGYLDPHYHGSNRLTKKSDVYSFGVVLLEIITNQPVMEGSGEKGHISERVSSMIAQGDIRAIVDSRLEENFDINSAWKAVEIALACVSPNTNERPIMSLVVLDLKESLATELARRKHNGAADPRYSVSPVSVNLDSESMPSAR 1641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00235 1641 MobiDBLite consensus disorder prediction 1622 1641 - -
Spst5g00235 1641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1454 1466 IPR008271 GO:0004672|GO:0006468
Spst5g00235 1641 Gene3D Ribonuclease Inhibitor 1187 1305 IPR032675 -
Spst5g00235 1641 Gene3D Ribonuclease Inhibitor 421 538 IPR032675 -
Spst5g00235 1641 SMART LRR_typ_2 1250 1273 IPR003591 -
Spst5g00235 1641 SMART LRR_typ_2 508 532 IPR003591 -
Spst5g00235 1641 SMART LRR_typ_2 484 507 IPR003591 -
Spst5g00235 1641 SMART LRR_typ_2 1274 1298 IPR003591 -
Spst5g00235 1641 SUPERFAMILY Protein kinase-like (PK-like) 613 899 IPR011009 -
Spst5g00235 1641 FunFam Leucine-rich repeat receptor-like kinase 1184 1309 - -
Spst5g00235 1641 SUPERFAMILY Protein kinase-like (PK-like) 1341 1601 IPR011009 -
Spst5g00235 1641 CDD STKc_IRAK 1342 1604 - -
Spst5g00235 1641 SUPERFAMILY L domain-like 436 530 - -
Spst5g00235 1641 SUPERFAMILY L domain-like 1213 1297 - -
Spst5g00235 1641 Gene3D - 242 408 - -
Spst5g00235 1641 FunFam Leucine-rich repeat receptor-like kinase 419 548 - -
Spst5g00235 1641 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 707 914 - -
Spst5g00235 1641 ProSiteProfiles Protein kinase domain profile. 1333 1606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00235 1641 ProSiteProfiles Protein kinase domain profile. 632 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00235 1641 Pfam Malectin-like domain 86 406 IPR024788 -
Spst5g00235 1641 Pfam Malectin-like domain 981 1173 IPR024788 -
Spst5g00235 1641 PANTHER OS07G0107800 PROTEIN-RELATED 84 905 - -
Spst5g00235 1641 MobiDBLite consensus disorder prediction 1627 1641 - -
Spst5g00235 1641 Gene3D Phosphorylase Kinase; domain 1 1340 1408 - -
Spst5g00235 1641 Gene3D Transferase(Phosphotransferase) domain 1 1409 1621 - -
Spst5g00235 1641 Gene3D Transferase(Phosphotransferase) domain 1 707 926 - -
Spst5g00235 1641 CDD STKc_IRAK 638 903 - -
Spst5g00235 1641 SMART serkin_6 632 875 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00235 1641 SMART serkin_6 1333 1600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00235 1641 ProSitePatterns Protein kinases ATP-binding region signature. 638 659 IPR017441 GO:0005524
Spst5g00235 1641 Gene3D Phosphorylase Kinase; domain 1 619 706 - -
Spst5g00235 1641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 753 765 IPR008271 GO:0004672|GO:0006468
Spst5g00235 1641 Pfam Protein tyrosine and serine/threonine kinase 634 899 IPR001245 GO:0004672|GO:0006468
Spst5g00235 1641 Pfam Protein tyrosine and serine/threonine kinase 1342 1599 IPR001245 GO:0004672|GO:0006468
Spst5g00235 1641 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 1408 1615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00235 Spst-Chr5 2105101 2122766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00235 65 937 Receptor kinase-like Gene Family AT2G19210 48.876 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst5g00235 Malectin_like 5e-113 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00235 - - vun:114185309 1292.72