Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00205 ATGGCATCATCCCTTTTCCTCATCCTATGTACTTCTCTCATCATTTTCATGCCCGCCACCAACACTCGTGTTCAAGCTTCCGTTCAATTCAAAGTTGGTGGTATCCTCGGTTGGCATGAACCTGCCCTCAACAATACTGATTTTTATAGCCAATGGGCTGAAAGGAACAGGTTTCAAGTCGGTGATGCTCTCGTTTTTGAGTACCAGAATGACTCAGTTCTTAGAGTGGAGGAATTGGATTACATGACTTGTGACGCAAGTAACCCTATCACAGCCTTTAACAATGGTAAGAGCACTTTTAATCTTGACAGGCCTGGGAACTTCTACTTCATTAGTGGAACCAATGACCACTGCAAAAATGGGCAAAGATTAGTTGTGGATGTGATGCATCCACATCCTATTCTTACATCTCCACCACCCATTTCTCTTCCACCCGAAGGCTTTCCACCGGAAGGTTTTCCACCAATGGATCCTCCACCTTTTGATCAAAGCTCAGATGATTCAACATCAGCCTCTGTGGTGCTTACTGCAACTTCTAGTTCTGTTTTGGTCACATTTGTTAGTGTGATGCTGTTAGCACCATGA 585 0.441 MASSLFLILCTSLIIFMPATNTRVQASVQFKVGGILGWHEPALNNTDFYSQWAERNRFQVGDALVFEYQNDSVLRVEELDYMTCDASNPITAFNNGKSTFNLDRPGNFYFISGTNDHCKNGQRLVVDVMHPHPILTSPPPISLPPEGFPPEGFPPMDPPPFDQSSDDSTSASVVLTATSSSVLVTFVSVMLLAP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00205 194 CDD OsENODL1_like 29 129 IPR041846 -
Spst5g00205 194 Gene3D - 28 135 IPR008972 -
Spst5g00205 194 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Spst5g00205 194 MobiDBLite consensus disorder prediction 136 172 - -
Spst5g00205 194 MobiDBLite consensus disorder prediction 136 161 - -
Spst5g00205 194 PANTHER BLUE COPPER PROTEIN 27 168 IPR039391 GO:0009055
Spst5g00205 194 FunFam Early nodulin-like protein 1 27 133 - -
Spst5g00205 194 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Spst5g00205 194 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00205 Spst-Chr5 1778002 1778798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00205 4 132 Phytocyanin Superfamily AT1G79800 50.388 3.45e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00205 - - gmx:102664880 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00205 5 1778002 1778798 Spst5g00205 5 1778002 1778798 ECH