Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00170 ATGAACGGTGCGGGGAGACAGGGGCTGAGATCTGGTGCGGCTGGTGTGCACCACCACCGCCAGTACTCCGATAACTTCCTCGATGGCTCCTCCAACGGCAACAGGTGGCTCCAATCGGCTGGCCTCCAACACCTTCAATCCTCCACCAATCAACTTCCTCCGCTTCAGGACTATAATTTGTACGGCGGCGGCGGCGGCGGAGCGCAGGGAGGAAGAATGTACCGGAACGCGCAGAGGGGCTTTAGCGGAGGAAATGAGTATTATGTGGAGCCTTCCACTCCTCCCGGTGGTTACCGTGCTTCGATGCAGAAAAAGAATGGCGATGATTTGTCTGGTGATTTCAGCCCCGGCTTGTTGGATCTGCATTCGTTCGACACCGAGCTTCTTCCTCCTGAGATGCCAGCCTCCAATGCATATGATGCAAACTCTATGTATCAACCTGGCCGAGGTAGAAGCTTTGATGACTCTGAACCTTACATGTTGAGCAAACAGACTGGCAGAGGTCGTGCTCCAGAAAACATATTGAAGAGTTTTCCCGCCGAAAAAGAGAAATCGAATTCTGTAGCAAAGATTAAAGTTGTGGTTCGTAAGAGACCAATGAATAAGAAAGAATTAGCAAAAAACGAGGAAGACATTATAGAAACATATTCAAATTCTTTAACAGTGCACGAGACTAAACTGAAGGTTGACTTAACTCAGTATGTAGAAAAGCATGAATTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACGAATGATGAGGTGTATCGTGAAACAGTAGAGCCCATAGTTCCAATAATATTTGAGCGCACTAAGGCAACATGCTTTGCATATGGACAAACAGGAAGTGGGAAAACTTACACTATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTTAGATTGATGCATCATACTTACCGAAACCAGGGATTTCAATTGTTTGTGAGCTTCTTTGAAATATATGGTGGCAAGCTTTTTGATCTTCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACCGGGTATCAGATGTGGAGAACATCAAAGAACTGATTGAGAAAGGAAATTCCACAAGAAGTACAGGCACCACAGGTGCAAATGAGGAATCATCACGGTCACATGCAATACTTCAACTTGCTATCAAGAGGTCAGTTGATGGAAATGAATCCAAACCTCCCCGTTTGGTTGGCAAACTCTCCTTCATAGATCTTGCTGGAAGCGAAAGAGGTGCAGATACGACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAATAAGAGCTTACTTGCCCTAAAGGAATGTATAAGAGCACTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTGGGCAACTCCCGCACTGTTATGATTTCATGCATATCACCAAGCACTGGTTCATGCGAGCATACTCTGAATACATTAAGATACGCTGACAGGGTGAAAAGCTTGTCAAAAGGAAACAACACAAAGAAAGATATGTCATCAAATTTCAATCTTAAAGAATCAAGTACGATTCCCTTATCTTCCACTACTGGATCAGGCTATGAGGATCGCACAACAGATGGATGGCCTGATGAAAATGAAGGGGATGATTTTAGTCCCCCTGAAGAGTACTACGAGCAGGTAAAACCATCTTTGAAGAAAAATGGAAAGATGGAATCATATGCTACAACAGATGACAAATTGAAGAAACCCAGTGGTCTGATGAAGTGGAAGGACCTCCCAAAAATTGAGCCTCAAACCACACACGCTGAGGATGATTTGAATGCCCTCTTGCAGGAAGAAGAGGACCTTGTAAATGCCCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAAATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGTTGGATGATTATATAACAAGACTAAATGCCATTCTTTCTCAGAAGGCCGCTGGCATCCTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTGAAGGACCATAATGTTTTGGTTTCATCTACTGCCGGTTACTGA 2118 0.44 MNGAGRQGLRSGAAGVHHHRQYSDNFLDGSSNGNRWLQSAGLQHLQSSTNQLPPLQDYNLYGGGGGGAQGGRMYRNAQRGFSGGNEYYVEPSTPPGGYRASMQKKNGDDLSGDFSPGLLDLHSFDTELLPPEMPASNAYDANSMYQPGRGRSFDDSEPYMLSKQTGRGRAPENILKSFPAEKEKSNSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIEKGNSTRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNTKKDMSSNFNLKESSTIPLSSTTGSGYEDRTTDGWPDENEGDDFSPPEEYYEQVKPSLKKNGKMESYATTDDKLKKPSGLMKWKDLPKIEPQTTHAEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKDHNVLVSSTAGY 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00170 705 PRINTS Kinesin heavy chain signature 463 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g00170 705 PRINTS Kinesin heavy chain signature 270 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g00170 705 PRINTS Kinesin heavy chain signature 413 431 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g00170 705 PRINTS Kinesin heavy chain signature 379 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g00170 705 MobiDBLite consensus disorder prediction 517 547 - -
Spst5g00170 705 ProSiteProfiles Kinesin motor domain profile. 190 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g00170 705 MobiDBLite consensus disorder prediction 514 564 - -
Spst5g00170 705 FunFam Kinesin-like protein 172 516 - -
Spst5g00170 705 ProSitePatterns Kinesin motor domain signature. 412 423 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst5g00170 705 PANTHER KINESIN-RELATED PROTEIN 6 574 699 IPR027640 GO:0003777|GO:0007018
Spst5g00170 705 SMART kinesin_4 188 519 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g00170 705 MobiDBLite consensus disorder prediction 369 388 - -
Spst5g00170 705 CDD KISc_KIF2_like 190 511 - -
Spst5g00170 705 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 513 IPR027417 -
Spst5g00170 705 MobiDBLite consensus disorder prediction 368 388 - -
Spst5g00170 705 Gene3D Kinesin motor domain 170 516 IPR036961 -
Spst5g00170 705 Pfam Kinesin motor domain 196 512 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00170 Spst-Chr5 1585255 1590032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00170 190 525 Calmodulin-binding Proteins AT5G65930 33.815 1.71e-44 170