Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00160 ATGCCAAAGAAAATTCGAGATTACCTCTTCAAAATCAAAAGCCCTCGCCCTCAAATCCGTTTACCCTCCAAGAATTGGATTCTCTCTGGCTGCAAACATCCTAGGACACCTTCCTTTGCCTTGTACAGTGGTAGAAACGAACCTCAAAATCACCGTCATGTTGTTCGTAACACCAACAAAAACAGTTATCACCACAAGGACGATGCAGCCACCTTAGCAGACGTTGACCGTTTCCTCTTCGAGAATTTCAAGTCTCTATACGTCAAAGACGAGGAAGAAACCTTAAACAGCAAAAGGGTCTTCGAAGGTGACGACCAAAAGCACGAGTTGGAAGAAACAACAACGCCACGTGATCTTCGTGGGTCCACTCGCTTCTTCGTGAAGGCAGGGTTTTCGGGGTCACTAGTGGAGGACGCTTTCACAAACACCACCATTAACACAACAACCAGTGATGAAGTAGGATCAGTCTCAACCCTCTACGATGTTTCGTCTTCCAGTTCTTACGAGAAAGAGGGTTTGGATCACGCGCTTCCGGATAACAGCATCGCGCTCTTGACGCACTCCACGACCCCTTATGAGGATTTTAAACGTTCCATGCAAGAAATGGTGAACAGCCATGAAAGGGTGGTTGATTGGGATTTCATGGAGGAGCTCTTGTTTACTTACCTTAATCTCAACCACAAAAAATCGCACAAGTTCATTCTCGGTGCTTTTGTGGATCTCATCACCGTCATGCGTCGGAGTACTTCCGAACCAGCTTCCGACAGGCCACGTAGCGTTCGAACCATTAGGACTGGTCGGGAGTTACGGGATAGGACCAAAAATGTAACTTTAGAATTTGGGTCCTCCTTGTAA 855 0.4667 MPKKIRDYLFKIKSPRPQIRLPSKNWILSGCKHPRTPSFALYSGRNEPQNHRHVVRNTNKNSYHHKDDAATLADVDRFLFENFKSLYVKDEEETLNSKRVFEGDDQKHELEETTTPRDLRGSTRFFVKAGFSGSLVEDAFTNTTINTTTSDEVGSVSTLYDVSSSSSYEKEGLDHALPDNSIALLTHSTTPYEDFKRSMQEMVNSHERVVDWDFMEELLFTYLNLNHKKSHKFILGAFVDLITVMRRSTSEPASDRPRSVRTIRTGRELRDRTKNVTLEFGSSL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00160 284 ProSiteProfiles OVATE domain profile. 184 244 IPR006458 -
Spst5g00160 284 NCBIfam uncharacterized plant-specific domain TIGR01568 182 244 IPR006458 -
Spst5g00160 284 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 74 245 IPR038933 GO:0045892
Spst5g00160 284 Pfam Transcriptional repressor, ovate 188 243 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00160 Spst-Chr5 1515133 1515987 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst5g00160 Ovate 2.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00160 - - vum:124828607 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00160 5 1515133 1515987 Spst5g00160 5 1515133 1515987 ECH
Spst5g00160 5 1515133 1515987 Spst4g02370 4 64261526 64262453 PCT