Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00157 ATGTTTCTAGAAGGTGAGAGGATTCTCCAGACATCTCTGGGGCCAATAGAGTGGAGCACATCTTTTGTTTCCAAAAACTGGCAATTTAACAAGTGCAAAGGTATTGTTTTTGACACAGATCAAGCAAAAATGAGCGTGGTCGGGTTTGATTTCGGTAATGAGAGCTGTATTGTTGCTGTTGCAAGGCAGAGGGGGATCGATGTGGTACTCAATGATGAGTCCAAGCGTGAAACACCTGCAATTGTATGTTTTGGTGACAAACAACGGTTCCTTGGGACAGCTGGGGCTGCATCTACTATGATGAATCCAAAGAATTCAATCTCACAAATAAAGAGGTTAATTGGTAGACAATTTGCTGATCCAGAACTGCAGCGAGATCTGAAGACATTCCCTTTTGCTGTCACTGAAGGGCCTGATGGATATCCATTGATTCATGCGCGGTACTTGGGTGAAGTTAAAACATTTACCCCTACACAAGTGTTCGGAATGATGTTATCAAACCTTAAAGAAATAGCTGAGAAGAATCTGAATGCTGCTGTTGTTGATTGCTGCATTGGAATTCCACTTTACTTTACTGATCTGCAGCGGAGGGCAGTTTTGGATGCTGCCACTATTGCGGGTTTGCACCCACTTCGCCTGTTTCATGAAACAACAGCAACTGCATTGGCTTATGGAATCTATAAGACCGACCTTCCTGAAAATGATCAGCTGAATGTTGCCTTTGTTGATGTTGGGCATGCTAGCATGCAAGTGTGCATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTGTTGTCCCAGTCATATGATAGGTCCCTAGGTGGGAGGGACTTCGACGAGGTTCTGTTCAATCATTTTGCTGCAAAGTTTAAGGAGGAGTACAAAATTGATGTATATCAAAACGCCAGGGCTTGTCTAAGGTTGAGGGCTGCATGTGAGAAGCTGAAGAAGGTGCTTAGTGCTAATCCAGAGGCACCTTTGAACATTGAGTGCTTAATGGAAGAGAAAGATGTCAGAAGCTTTATCAAGCGGGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGAGTGAAAGGACCTCTGGAGAAGGCACTTGCAGAGGCAGGTCTTACAGTTGAAAATGTTCACATGGTTGAGGTGGTTGGTTCTGGATCTCGTGTACCAGCTGTAAACAAAATATTGGCAGAGTTCTTCAAAAAGGAGCCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAGGGGTTGTGCATTGCAGTGTGCAATTCTCAGTCCGACTTTTAAAGTTCGGGAGTTTCAGGTCAACGAAAGCTTTCCTTTCTCAATTTCACTCTCGTGGAAAGGTGCAAGTTCTGATGCACAGGATAGTGGACCAGATAATGTACAAAGTACCCTTGTTTTCCCCAAGGGAAATCCCATACCAAGTGTGAAGGCATTGACAATCTACAGGCGAGGAACCTTTTCTATTGATGTTCAATATGATGATGTGAGTGGTTTGCAAACACCTGCAAAGATCAGCACATACACTATTGGCCCTTTTCAATCAACAAAAAGTGAAAAAGCAAAAATTAAAGTGAAAGTTAGGTTGAATCTGCATGGAGTTGTATCTATCGAATCTGCAACTCTCTTGGAAGAGGAGGAAATTGAGGTTCCTGTTTCCAAAGAATCAGCAGAAGATACCAAGATGGAAACTGATGAAGCTCCTGCTGATACTCCTGCACCTCCTAGCACCAATGACAATGATGTCAACATGCAAGATGCTAATGCCAATGCAGGTTCTGATGTCCCTGGGGCTGAAAATGGTATTCCTGAGGCAGGAGATAAGCCTGTGCAAATGGATACTGATACCAAGGCCGAGGCTCCAAAGAAAAAAGTTAAGAAAATAAATATTCCTGTCGTGGAGTTAGTTTACGGAGCAATGTCACCTGCCGATGTTCAGAAAGCTGTCGAGAAGGAGTTTGAAATGGCGTTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCTGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCATGAGTTTGTCATTGATTCAGAGAGGGAAGCATTTACTGCTAAGCTTCAGGAGGTGGAAGACTGGCTATATGAGGATGGTGAAGATGAAACTAAAGGTGTATACATTGCCAAACTAGAAGAGCTCAAGAAGCAAGGTGATCCAATTGAAGAGCGTTACAAAGAATCCATGGAGAGGGGTTCAGTAATTGATACTCTCGTCTATTGTATAAATAGTTACAGAGATGCTGCAATGTCAAATGAACCCAAATTTGATCACATCGACATCGATGAGAAACAGAAGGTCCTAAATGAATGTGTGGAAGCTGAGAACTGGCTCAGGGAGAAAAAACATCAGCAGGACTCGCTTCCAAAATATGCTTCCCCTGTACTTTTGTCAGCTGATATAAGAAAGAAAGCTGAAGCTGTTGACAGGTTCTGTAAGCCAATTATGACAAAACCAAAGCCACCACCACCAAAGCCAACCACTCCAGAAGCACCAGCAACCCCACCTCCTCAGGCCAGTGAGCAGCAACAGCAACAGCAACAAACACCACCTAAGGAGAATCCTAATGCCAGTAGTAATGAAAATGCAGGGGACAATGGTAGTACAGCCCCGCCACCGGCATCTGGTGAACCAATGGAGACTGAGAAATCAGAGAACACAGGCTCTGCTTAA 2718 0.4356 MFLEGERILQTSLGPIEWSTSFVSKNWQFNKCKGIVFDTDQAKMSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGAASTMMNPKNSISQIKRLIGRQFADPELQRDLKTFPFAVTEGPDGYPLIHARYLGEVKTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPLYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLSQSYDRSLGGRDFDEVLFNHFAAKFKEEYKIDVYQNARACLRLRAACEKLKKVLSANPEAPLNIECLMEEKDVRSFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHMVEVVGSGSRVPAVNKILAEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFSISLSWKGASSDAQDSGPDNVQSTLVFPKGNPIPSVKALTIYRRGTFSIDVQYDDVSGLQTPAKISTYTIGPFQSTKSEKAKIKVKVRLNLHGVVSIESATLLEEEEIEVPVSKESAEDTKMETDEAPADTPAPPSTNDNDVNMQDANANAGSDVPGAENGIPEAGDKPVQMDTDTKAEAPKKKVKKINIPVVELVYGAMSPADVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYHEFVIDSEREAFTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKESMERGSVIDTLVYCINSYRDAAMSNEPKFDHIDIDEKQKVLNECVEAENWLREKKHQQDSLPKYASPVLLSADIRKKAEAVDRFCKPIMTKPKPPPPKPTTPEAPATPPPQASEQQQQQQQTPPKENPNASSNENAGDNGSTAPPPASGEPMETEKSENTGSA 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00157 905 FunFam Heat shock 70 kDa protein 4 273 356 - -
Spst5g00157 905 MobiDBLite consensus disorder prediction 831 851 - -
Spst5g00157 905 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 430 637 IPR029047 -
Spst5g00157 905 MobiDBLite consensus disorder prediction 571 590 - -
Spst5g00157 905 PRINTS 70kDa heat shock protein signature 406 426 - -
Spst5g00157 905 PRINTS 70kDa heat shock protein signature 375 391 - -
Spst5g00157 905 PRINTS 70kDa heat shock protein signature 45 58 - -
Spst5g00157 905 PRINTS 70kDa heat shock protein signature 73 85 - -
Spst5g00157 905 PRINTS 70kDa heat shock protein signature 183 203 - -
Spst5g00157 905 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 427 673 IPR029047 -
Spst5g00157 905 Gene3D - 81 156 - -
Spst5g00157 905 CDD HSPA4_like_NDB 45 424 - -
Spst5g00157 905 MobiDBLite consensus disorder prediction 548 566 - -
Spst5g00157 905 SUPERFAMILY Actin-like ATPase domain 238 423 IPR043129 -
Spst5g00157 905 FunFam Heat shock 70 kDa protein 4 81 156 - -
Spst5g00157 905 FunFam Heat shock 70 kDa protein 4 44 121 - -
Spst5g00157 905 MobiDBLite consensus disorder prediction 852 884 - -
Spst5g00157 905 Pfam Hsp70 protein 46 741 IPR013126 GO:0005524|GO:0140662
Spst5g00157 905 Gene3D - 229 403 - -
Spst5g00157 905 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 752 840 IPR029048 -
Spst5g00157 905 FunFam Heat shock 70 kDa protein 14 430 638 - -
Spst5g00157 905 Gene3D - 640 746 IPR029048 -
Spst5g00157 905 FunFam Heat shock 70 kDa protein 4 154 248 - -
Spst5g00157 905 SUPERFAMILY Actin-like ATPase domain 44 228 IPR043129 -
Spst5g00157 905 Gene3D - 48 417 - -
Spst5g00157 905 MobiDBLite consensus disorder prediction 548 622 - -
Spst5g00157 905 MobiDBLite consensus disorder prediction 827 905 - -
Spst5g00157 905 Gene3D - 747 834 IPR029048 -
Spst5g00157 905 PANTHER HSC70CB, ISOFORM G-RELATED 44 874 - -
Spst5g00157 905 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 642 740 IPR029048 -
Spst5g00157 905 FunFam Heat shock 70 kDa protein 4 640 750 - -
Spst5g00157 905 Gene3D Actin; Chain A, domain 4 273 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00157 Spst-Chr5 1495395 1500277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00157 47 477 Calmodulin-binding Proteins AT1G16030 35.253 4.03e-86 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00157 K09489 - gmx:100778196 1491.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00157 5 1495395 1500277 Spst5g00157 5 1495395 1500277 ECH
Spst5g00157 5 1495395 1500277 Spst4g02371 4 64265789 64271346 PCT