Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00126 ATGTGCTCTGTTCCGTTCCGTGTCAAATTGAGTGTGGATGCAGATATGGAAAGCTTCAAATATCCTTTCAAGGGTATTAAAAACGACCTTCGAGGAAGAGCAGTGTACTATAAAGATGATTGGAAAACTGGTCTCTATTCAGGAGCTGGAATATTGGCCCCTACTACCTATATTTTCTTTGCTTCTGCTCTTCCTGTGATTGCCTTTGGCGAGCAGCTAAGTAGAGACACAGATGGAAGCTTGAGCACAGTAGAAACACTGGCTTCTACAGCTATTTGTGGAATCATACATTCAATTTTGGGTGGCCAGCCTCTCCTAGTTGTAGGAGTTGCTGAACCCACTATCATTATGTACACCTATTTGTACAACTTTGCCAAAGATAACGATTTCTTGGGTCGAGAACTCTTCTTAGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTGTTGCTGTTTCTCCTTGCAATATTCAATGCTGGAAATATCATCAATAGATTTACAAGGATAGCGGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCATTCAAGAGGCTATAAAGGGCATTGTAAGTGAGTTTAATGTTCCTAAAGAGGGAGACCCAACTTCGGAAAAGTACCATTTTGATTGGCTGTATGCAAATGGGTTGCTGGGTATTATATTCACCTTTGGCCTTCTCTATACTTCTTTGAAGAGCAGAAGAGCAAGGTCATGGTTGTACGGCACAGGTTGGTTTAGAAGTTTCGTTGCAGACTATGGGGTGCCTTTCATGGTGGTGGTGTGGACAGCACTATCATTCGTAGTACCAAGTAAAGTGCCTTCAGGAGTTCCCAGAAGGCTCAATTCTCCTCTTGCTTGGGAGTCTACATCTTTACATCACTGGACAGTAATCAAAGATATGGGGAACGTTTCTCCGACGTACATTTTTGCTGCTTTCATTCCAGCCTTAATGATAGCGGGGCTTTACTTCTTTGATCATTCTGTTGCTTCCCAGTTGGCTCAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATACCACTATGACTTACTGTTGCTAGGACTAACGACTTTGATTTGTGGATTAATTGGCTTACCCCCTTCAAATGGAGTTCTACCTCAATCTCCTATGCACACCAAGAGCCTGTCTGTTCTCAAGAAACAGTTGATCCGAAGAAAGATGGTTCAAAGTGCCAAGGAAAGCATAAGTCAGAAAGCTAGCAAGTCTGAAATCTATGGAAAGATGCAAGCAGTGTTTATAGAAATGGATAACTGTCCAGATAATCATTCAGTGGTCAAAGAACTAGAGGATTTGAAAGAGGTTGTCTTGAACGGTGAAGACAAAGGAGTTGACAACAAGAGTACCTTCGATCTTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTTTTACAATCAATCCTTGTAGGAGCATCAGTCTTTGCTATGCCTGCCATAAAAAAGATACCAACTTCTGTTCTCTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGATCCTACTCCTTTTTGTAACACCTAGTAGGTGGCACAAGTTGTTGGAGGCGGATCATGCATCCTTTGTTGAGTCAGTACCTTACAGATACATAATATTCTTCACACTCTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTGCTGATCACATTGAGGCAGCATATACTCCCCAAGCTGTTCAAACCTCACCATCTTAGGGAACTAGATGCAGCTGAATATGAAGAAATAGTTGCTGCTCCAGGACTAACTTTCAATAATTCTTTAAGGGAAGTAGAATCACCCAGAGTTGGATCAATGGAAATAGATAATGCTGAAATATTAGATGAGTTAACTACAAATAGAGGGGAGTTGAAGGTCAGAACTATCAGCTTTACCGAGGAAAGAAATCACCAGGTGTACCCTGATAAAAATGGATCCCCAGGCACAGATTGTTAG 2055 0.417 MCSVPFRVKLSVDADMESFKYPFKGIKNDLRGRAVYYKDDWKTGLYSGAGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLVVGVAEPTIIMYTYLYNFAKDNDFLGRELFLAWAGWVCVWTALLLFLLAIFNAGNIINRFTRIAGELFGMLITVLFIQEAIKGIVSEFNVPKEGDPTSEKYHFDWLYANGLLGIIFTFGLLYTSLKSRRARSWLYGTGWFRSFVADYGVPFMVVVWTALSFVVPSKVPSGVPRRLNSPLAWESTSLHHWTVIKDMGNVSPTYIFAAFIPALMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDLLLLGLTTLICGLIGLPPSNGVLPQSPMHTKSLSVLKKQLIRRKMVQSAKESISQKASKSEIYGKMQAVFIEMDNCPDNHSVVKELEDLKEVVLNGEDKGVDNKSTFDLEKHIDAYLPVRVKEQRVSNLLQSILVGASVFAMPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWHKLLEADHASFVESVPYRYIIFFTLFQCVYFLVCFGVTWIPIAGILFPLPFFLLITLRQHILPKLFKPHHLRELDAAEYEEIVAAPGLTFNNSLREVESPRVGSMEIDNAEILDELTTNRGELKVRTISFTEERNHQVYPDKNGSPGTDC 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00126 684 Gene3D Helical hairpin bin 33 75 - -
Spst5g00126 684 PANTHER ANION EXCHANGE PROTEIN 17 617 IPR003020 GO:0005452|GO:0006820|GO:0016020
Spst5g00126 684 Pfam HCO3- transporter family 215 389 IPR011531 GO:0006820|GO:0016020
Spst5g00126 684 Pfam HCO3- transporter family 22 195 IPR011531 GO:0006820|GO:0016020
Spst5g00126 684 Pfam HCO3- transporter family 469 559 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00126 Spst-Chr5 1166758 1171045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00126 13 676 Antiporters AT1G74810 69.955 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00126 K24194 - gmx:100811184 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst9g00815 9 7085903 7089274 Spst5g00126 5 1166758 1171045 ECH
Spst5g00126 5 1166758 1171045 Spst5g00126 5 1166758 1171045 ECH