Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00095 ATGGCGCAAATTCTGCTCCATGGCACTCTTCATGCCACAATCTATGAAGTGGATAAGCTCAAAATTGGTGGTGACAATTTCATAACCAAGGTCTTACATAACGTCGAGGAGAAGGTTGGTTTTGGAAAGGGTATCACTAAACTATATGCAACCATTGATCTAGAGAAGGCTCGAGTGGGAAGGACCAGAATTATAGAAAAGGAGCACAGTAATCCAAGATGGTACGAGTCCTTTCACATTTACTGTGCCCATATGGCATCAAACATCATATTTACAGTGAAAGATGGTAATCCTATTGGGGCAACCTTAATTGGAAGAGCATATGTGCCTGTTGAGGAAATCTTGGATGGTGAAGAAATAGATAGATGGGTTGAAATATTGGATGTGCATAAAAATCCAATACATGGAAATTCCAAGATCCACGTGAAGCTGCAATATTTTGATATTTCAAAAGACCGGAACTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATACTTTTTTTTCACAAAGAAGAGGATGTAAGGTTTCCCTGTACCAAGATGCTCATGTACCAGACAACTTTGTCCCTAAAATACCACTTAGTGGCGGGCAGACTTACCAACCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACTAAAGCGCAGCACATAATATACATTACCGGTTGGTCTGTCTATACTGAGATTACGTTGGTAAGGGATTCTAGGAGGCCAAAGCCTGGAGGAGATGCAACACTTGGTGAGCTTCTGAAGAAAAAAGCAAATGAAGGTGTCAGGGTTTTAATGCTTGTCTGGGATGATAGAACTTCGGTTCCTTTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACAGAGGAGTACTTCAGGGGCACCGAAGTGCATTGTGTTTTATGCCCTCGCAATCCTGATGATGGTGGAAGCATTGTTCAGGATTTGGAAATTTCCACCATGTTTACTCATCACCAGAAAATCGTAGTGGTGGACAGTGACTTACCGAGTGGAGAATCTGATAGGCGAAGAATTGTTAGTTTTGTGGGGGGTATTGATCTCTGTGATGGAAGGTATGACACTCAATTCCATTCTCTTTTCAGAACTCTGGACACAGCACACCATGATGATTTTCATCAGCCTAACTTCGGTGGTTCTTCAATAAAGAAAGGTGGCCCCAGGGAACCTTGGCATGACATCCACTCTCGACTTGAAGGGCCTATTGCTTGGGATGTTTTGTTCAACTTTGAGCAAAGATGGAGGAAGCAGGGAGGAAAGGACTTACTTGTTCCACTGAGAGACCTTGAAAATGTTATTATTCCTCCATCCCCAGTAACTTACCTTGATGATCGTGAGACATGGAACGTTCAGTTATTTAGATCCATTGATGGAGGAGCTGCTTTTGGGTTCCCAGATACTCCTGAAGATGCTGCTAGAGCCGGGCTAGTTAGTGGGAAGGATAATATAATAGATCGAAGTATACAAGATGCTTATATTAATGCCATTAGACGCGCAAAAAATTTCATCTATATTGAGAATCAGTATTTCCTTGGAAGCTGTTATGCTTGGAGTGCTGATGGCATTAAGCCTGAAGACATTGGTGCTTTGCATCTAATCCCAAAGGAGCTTTCACTCAAGATTGTAAGTAAGATTGAAGCTGGGGAGAGGTTCAATGTGTACGTTGTTGTTCCAATGTGGCCAGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTGGATTGGCAGAGGAGAACAATGGATATGATGTACAAGGATGTCGTTGAGGCACTCCGGGCAAAGGGAATAGAAGAAAATCCTCGGAACTATTTGACATTCTTCTGCCTTGGTAATCGGGAGGTGAAGAAAGAAGGAGAGTACCAGCCTCCAGAAAGCCCAGATGCTAATACAGATTATATAAGAGCCCAAGAGGCCCGGCGCTTCATGATATATGTTCATGCCAAGATGATGATAGTTGACGATGAGTACATAATTGTTGGATCTGCCAACATAAACCAGAGATCAATGGATGGTGCAAGAGACTCTGAGATTGCAATGGGTGCTTATCAACCCTTTCATTTGGCGACGACACAGCCTGCAAGGGGTCAGATCCATGGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGCATGCTTCATGACTCCTTCCTTTATCCTGAAACTACAGAATGTATCAGGAAGGTGAACCAGATTGCTGACAAGTATTGGGATCTCTATTCGAGTGAAACCCTTGAACATGACCTTCCAGGCCATTTACTCAGCTATCCTATTGGGGTTTCCAGCGAAGGAACTGTCACCGAGCTTCCAGGATTTGAATTCTTTCCTGACACCAAGGCCCGAGTTCTTGGCGACAAAGTTGACTACCTGCCACCCATCCTCACTACTTAA 2424 0.4328 MAQILLHGTLHATIYEVDKLKIGGDNFITKVLHNVEEKVGFGKGITKLYATIDLEKARVGRTRIIEKEHSNPRWYESFHIYCAHMASNIIFTVKDGNPIGATLIGRAYVPVEEILDGEEIDRWVEILDVHKNPIHGNSKIHVKLQYFDISKDRNWALGIRSPKFPGVPYTFFSQRRGCKVSLYQDAHVPDNFVPKIPLSGGQTYQPHRCWEDVFDAITKAQHIIYITGWSVYTEITLVRDSRRPKPGGDATLGELLKKKANEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEYFRGTEVHCVLCPRNPDDGGSIVQDLEISTMFTHHQKIVVVDSDLPSGESDRRRIVSFVGGIDLCDGRYDTQFHSLFRTLDTAHHDDFHQPNFGGSSIKKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRDLENVIIPPSPVTYLDDRETWNVQLFRSIDGGAAFGFPDTPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFNVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDVVEALRAKGIEENPRNYLTFFCLGNREVKKEGEYQPPESPDANTDYIRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPFHLATTQPARGQIHGFRMSLWYEHLGMLHDSFLYPETTECIRKVNQIADKYWDLYSSETLEHDLPGHLLSYPIGVSSEGTVTELPGFEFFPDTKARVLGDKVDYLPPILTT 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00095 807 Gene3D Endonuclease Chain A 477 696 - -
Spst5g00095 807 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Spst5g00095 807 SUPERFAMILY Phospholipase D/nuclease 151 442 - -
Spst5g00095 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 653 680 IPR001736 GO:0003824
Spst5g00095 807 PIRSF PLD_plant 1 807 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Spst5g00095 807 SMART pld_4 325 363 IPR001736 GO:0003824
Spst5g00095 807 SMART pld_4 653 680 IPR001736 GO:0003824
Spst5g00095 807 FunFam Phospholipase D delta 200 443 - -
Spst5g00095 807 Gene3D Endonuclease Chain A 199 438 - -
Spst5g00095 807 Pfam C2 domain 10 126 IPR000008 -
Spst5g00095 807 CDD PLDc_pPLDalpha_2 491 700 - -
Spst5g00095 807 SMART C2_3c 9 123 IPR000008 -
Spst5g00095 807 CDD C2_plant_PLD 2 147 - -
Spst5g00095 807 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Spst5g00095 807 FunFam Phospholipase D 466 699 - -
Spst5g00095 807 Pfam Phospholipase D C terminal 726 796 IPR024632 -
Spst5g00095 807 Gene3D C2 domain 6 156 IPR035892 -
Spst5g00095 807 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Spst5g00095 807 SUPERFAMILY Phospholipase D/nuclease 447 737 - -
Spst5g00095 807 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 325 363 IPR001736 GO:0003824
Spst5g00095 807 Pfam Phospholipase D Active site motif 325 363 IPR001736 GO:0003824
Spst5g00095 807 Pfam Phospholipase D Active site motif 654 680 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00095 Spst-Chr5 964004 968883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00095 1 807 Phospholipase D Gene Family (Wang group) AT3G15730 80.000 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00095 K01115 - gmx:100784434 1562.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g02413 4 64568525 64572099 Spst5g00095 5 964004 968883 ECH
Spst9g00791 9 6816877 6820097 Spst5g00095 5 964004 968883 ECH
Spst5g00095 5 964004 968883 Spst5g00095 5 964004 968883 ECH
Spst5g00095 5 964004 968883 Spst4g02413 4 64568525 64572099 PCT