Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00070 ATGTCGAAGGCTTCTCCATCTTCAAGAACCCAAACGTCGCCGCGCTCGTACTCCTCCGCATTCGCGTCCACGTCGGCGACGAATTTCTATCCTGGAACGTACTCCTCGGCGAACGCCAAAGTGCAGCGCCACTTTAGGTCATCATCAACGTCGCCGACGGTGAGATTCTTGGCGGTGGAGCAGAGAGCGGAGTCTCCGGTGCGGCAGTCGATAACCGTGACGACGAATAGTCAAAGGAACAAAGAGGCGGTATCGTCGTCGTCTTCGTCGAAGAGTGAGAGCGAGAAGAGGACGTGCATGTGTTCTCCAACGACGCACGCTGGGTCGTTCCGATGCGCGTTCCACAAACAGTTAGTGGAGAGGCAGCGGCAGCGGCAGCAGACGACGTCGTTAAACGGTAGAAAACTGAACCTTCTGAGATCAGCGATGAAGAATTCGGTGGTGCGGATTGGAGGAGTGGAGGGAGAGATTCTGAGGAGAGCCTTGACGACTCTGATTAGACCATCGTCGCATCACTTGCGTCGGCGTGAAGCCTTTGAGCCCAGGCCCACTCGCCTCTCCCTCATACAGTTAGGTTTGGACAGTTTAGTTACACTGGCAGGTAAGCATGATTATTCACGTGGAGGTGATGGCAGAGGGAGAAGCTATTGTCAGTTAGTTTGTCATAATCATATCTCAAAAATGGCGAGGCTGGTTCTCAAAGCTGGCAGCAGACCCCCATGGGTGGGTCTTGCGGCTGCAGTTTGGATTCAGATAGCAGTTGGGAATCCATTCAACTTCCCTCTCTATTCTTCTGCCCTCAAATCTGTGTTGTCTCTCAACCAGCAACAGATCACTATTCTGGGAGTGGCCAATGATTTTGGGGAGAGCATGGCTCTGCTTCCCGGCATTGCCTCCAACAAGTTCCCTCCTTGGGCTTTCCTTCTCCTTGGTTCTCTCCTTTGTTTCTTTGGTTATGGCCTTATCTACCTCACTGTTACCCAAATTGTTTCTCAAATCCCCTATATCCTGATATGCCTTGCCCTGTGTGTTGCCACTAACAGCAGTGCATGGTTTGGAACAGCTGTGTTTGTCACCAACATGAGAAACTTTCCTCTCAGTAGAGGCACCATCTCTGGCATTCTTAATGGTTATGGCGGGATCAGTGCTGAAGTATACACCTTAATTTATAGCATGGTGCTGAAAGGGTCAGCTTCTAAATTACTCTTGTTCCTAACAATTGGACTTCCTGCTGTATGTTTAGTTTTGATGTTCTTCATTCGGCCTTGCACTCCTCCTTCTGGGGAAGACTCTTCAGTGCATGTGCATTTTATTTTTGTCCAAGTTGCAAGTGTTTTACTTGCCTCCTATCTTGTTACCACCACAATTGCGAGTGACATGGTCTCTATGAATGATGCTGTTACCTACATCTTGGTTCCCATAATGGTTATACTTCTGATAGCTCCCCTTGCAATTCCTATCAAAATGACACTATTTCCTTCTAATTCAAAGAGAAATGTTTCGCTGGCTGGTTCTTCAGATCATTTGGCATCAGGCGATGACATTTCAAGGCAGACAAGTCCATTGCTCACACCATCTTCGTCAGCTGCCATTCTTGAGAGTTTTCATGAAAGTGGTGATGTCTCGGATGTTGAGATGCTCATTGCAGAAGGACAGGGAGCCGTGAGGGAGAAAAGGAGACCTAAGAGGGGTGATGATTTCAAGTTCCGTGAAGCTTTCATCAAGGCAGACTTTTGGCTTTGCTGGTTTGCTTATTTTCTTGGGGTGGGCTCAGGAGTAACAGTTCTCAATAATCTGGCTCAAATTGGAGTTGCCTTGGGTGTAGACGATACAACCATATTGCTCTCAGTCTTCAGCTTCTGCAATTTTATAGGCCGTCTTGGCGCTGGTGTTGTTTCTGAATACTTTGTTAGGTTGATAGCACTACCTCGAACATTTTGGATGACAAGTACACAAATAATCATGAGCATAGCACTTTTACTTTATGCTTCTGCTGTAGACGGCACTCTTTATGCTGCAACTGCTTTGCTTGGTATCTGCTATGGGGTTCAATGTTCTATTATGGCTCCAACTATCTCTGAGCTTTTTGGTTTGAAACACTTTGGTGTTATTAGTAGCTTCATGATGCTAGGCAATCCAATTGGTGCCCTTATTTTCTCTGTTTTTCTTGCGGGCAATGTGTATGATACAGAAGCTAAAAAGCAAGGAAACTCCACCTGCTATGGTGCAGATTGCTTCAGGTTCACTTTTCTGGTTTTGGCTGGTGTCTGTGGACTTGGTACCATCATCAGTATGATTTTGACACTTAGAACGCGACCAGTGTATCGAATGCTATATGCTGGAGGTTCATTTCGTCTATCTCAGACTTCAATCCACTGA 2379 0.4691 MSKASPSSRTQTSPRSYSSAFASTSATNFYPGTYSSANAKVQRHFRSSSTSPTVRFLAVEQRAESPVRQSITVTTNSQRNKEAVSSSSSSKSESEKRTCMCSPTTHAGSFRCAFHKQLVERQRQRQQTTSLNGRKLNLLRSAMKNSVVRIGGVEGEILRRALTTLIRPSSHHLRRREAFEPRPTRLSLIQLGLDSLVTLAGKHDYSRGGDGRGRSYCQLVCHNHISKMARLVLKAGSRPPWVGLAAAVWIQIAVGNPFNFPLYSSALKSVLSLNQQQITILGVANDFGESMALLPGIASNKFPPWAFLLLGSLLCFFGYGLIYLTVTQIVSQIPYILICLALCVATNSSAWFGTAVFVTNMRNFPLSRGTISGILNGYGGISAEVYTLIYSMVLKGSASKLLLFLTIGLPAVCLVLMFFIRPCTPPSGEDSSVHVHFIFVQVASVLLASYLVTTTIASDMVSMNDAVTYILVPIMVILLIAPLAIPIKMTLFPSNSKRNVSLAGSSDHLASGDDISRQTSPLLTPSSSAAILESFHESGDVSDVEMLIAEGQGAVREKRRPKRGDDFKFREAFIKADFWLCWFAYFLGVGSGVTVLNNLAQIGVALGVDDTTILLSVFSFCNFIGRLGAGVVSEYFVRLIALPRTFWMTSTQIIMSIALLLYASAVDGTLYAATALLGICYGVQCSIMAPTISELFGLKHFGVISSFMMLGNPIGALIFSVFLAGNVYDTEAKKQGNSTCYGADCFRFTFLVLAGVCGLGTIISMILTLRTRPVYRMLYAGGSFRLSQTSIH 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00070 792 CDD MFS_Mch1p_like 239 761 - -
Spst5g00070 792 MobiDBLite consensus disorder prediction 65 97 - -
Spst5g00070 792 Gene3D MFS general substrate transporter like domains 573 777 IPR036259 -
Spst5g00070 792 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 241 776 - -
Spst5g00070 792 SUPERFAMILY MFS general substrate transporter 467 773 IPR036259 -
Spst5g00070 792 MobiDBLite consensus disorder prediction 61 97 - -
Spst5g00070 792 Pfam Nodulin-like 240 487 IPR010658 -
Spst5g00070 792 SUPERFAMILY MFS general substrate transporter 227 425 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00070 Spst-Chr5 828914 833765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00070 228 790 Nodulin-like Gene Family AT1G80530 59.858 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00070 - - psat:127087605 848.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05027 3 102072624 102073235 Spst5g00070 5 828914 833765 ECH
Spst9g02675 9 60819083 60819655 Spst5g00070 5 828914 833765 ECH
Spst5g00070 5 828914 833765 Spst5g00070 5 828914 833765 ECH