Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00068 ATGTCTCACAGAAAGGATTATTCCTCGCTACCCGCTAGCTCCTATTTAGAATTGCAGCGTCAAAATGACTCCACAAAATCCTCACGCCAGGTTTCTTTTGACGAATCTGAGATGTATTTGGGATCCAAGGTCGACGAAGACGATGAAGATTTGGAAATGGACGTCGATAATTACCCCCTTGTTGTCGTGGGGTCCAATCAAGGCTCTGGGATACCTGGGGCTGTTTTCAATTTAACAACCACTGTTATTGGGGCAGGGATCATGGCTCTCCCTGCCACTATGAAAGTTCTAGGACTGGTTTTGGGGATTATTTTGATCATTCTTATGGGAATTTTGTCTGAAATTAGCGTGGAATTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGCATCCTCGTATGGGGAGGTTGTTCAGCACGCAATGGGAAGACCTGTGAGGATTTTGTCTGAAATCTGTATTATAGTGAATAATGCTGGCGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCCGGTCGCCATATAGGGGTTTTTGATCAGTTAATGGGGAATGGGGTTTGGGATCAAAGGAAGGTTGTGATTTTAGTTGTCATGGTGATTTTCCTTGCTCCCCTTTGTTCACTTGACAAAATTGATTCATTGAGTTTGACCTCGGCTGCCTCCGTGGCTCTTGCTGTCTTGTTTGTCATTGTTACTTTTACAGTTGCTTTCATTAAGCTCGTGGAAGGACGGATTGATTCTCGCAGGATGGCTCCTGATCTTAGCTCCAAAGCTGCAGTTTTGGATTTTCTTGTTGCTATACCTATCATGACCAATGCATATGTTTGCCATTTTAATGTGCAGCCCATATATAATGAGCTTGAACAACGGTCCCCTCAGAAGATGAACCGAGTTGGGAGATACACCACAGTTTTGTGCATCCTAGTTTATGCTTCCACTGCCATATCGGGTTACCTGCTCTTCGGGAAAGACACAGAGGCTGATGTGCTGACTAATTTTGATAAGGATCTTGGAATTCGGTATAGCTGGGTCTTGAACTTTGTTGTCCGGGTTGGTTACATTTTTCATTTGATACTTGTTTTCCCTGTTATTCATTTCTCACTGCGCCAAACAGTGGACACATTAGTGTTTGAGGGATCACCTCCCCTTTCAGAAAGTAAGAAGAGATCTTTGGGGCTGACTGCCGTTCTGTTGGTCCTCATATATATTGCGTCTACTATGATTCCAAACATATGGACAGCTTTTAAGTTCACTGGTGCAACCACGGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTTCATTGAGATTAAGTCATCTGGGGGATATAAGCTATGGGGAATGGATTTTATCATGGTTGATGTTGGTATTGGCTGTGACTGTTAGCATAGTAGGAGTTGTTAGCAATGTCTATAGCCTTGAGAGTAAGTCTTAA 1446 0.4281 MSHRKDYSSLPASSYLELQRQNDSTKSSRQVSFDESEMYLGSKVDEDDEDLEMDVDNYPLVVVGSNQGSGIPGAVFNLTTTVIGAGIMALPATMKVLGLVLGIILIILMGILSEISVELLVRFSVLCKASSYGEVVQHAMGRPVRILSEICIIVNNAGVLVVYLIIMGDVMSGSGRHIGVFDQLMGNGVWDQRKVVILVVMVIFLAPLCSLDKIDSLSLTSAASVALAVLFVIVTFTVAFIKLVEGRIDSRRMAPDLSSKAAVLDFLVAIPIMTNAYVCHFNVQPIYNELEQRSPQKMNRVGRYTTVLCILVYASTAISGYLLFGKDTEADVLTNFDKDLGIRYSWVLNFVVRVGYIFHLILVFPVIHFSLRQTVDTLVFEGSPPLSESKKRSLGLTAVLLVLIYIASTMIPNIWTAFKFTGATTAVSLGFIFPSLVSLRLSHLGDISYGEWILSWLMLVLAVTVSIVGVVSNVYSLESKS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00068 481 MobiDBLite consensus disorder prediction 1 33 - -
Spst5g00068 481 Pfam Transmembrane amino acid transporter protein 70 470 IPR013057 -
Spst5g00068 481 PANTHER AMINO ACID TRANSPORTER 66 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00068 Spst-Chr5 821671 823116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00068 7 481 Amino Acid or Auxin Permease AAAP Family AT1G80510 70.661 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00068 - - gmx:100791860 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00068 5 821671 823116 Spst5g00068 5 821671 823116 ECH