Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00057 ATGAATCCTCTTGTTCTCTTCGTGCCTATTTGGGTGCTAGGCATTTCTCTTTCCTCGCCAATTCTTCATGCTGCAACCTCCATTTCTGTTTCTCAAAATGCACAAGCTGAATCTCCAGGTATTCAGGAGGTTAGAGCAGTGCACCATCAGAATTTGAATAAGGGAATTCTAATTGCATTAGTTGGTTGTTCTGCTCTTCTTGGTGGAATCTTCCTAATCATATTTTGTGTCTGGTTCCGTCGACATAAACACGTAAAATGCTCCAAAAGTAAAAATCAAGAAACCACTGAGGCTGCAAAAGGGGAAACTTTAAGCTCTGTTAATGCTAAGCATAACTACTCTAGGATGGCAGATAAGAAAAGTTCAGTGGCTATTTTTGACTATCAGCTGTTAGAGGCTGCTACAAACAGCTTTAGCACAAGTAATATTATGACAGAGAGTGGTTCTAGGATCGTTTACAGAGCTAGTTTTGACGAGCATTTCCAGGCAGCTGTTAAGAAAGCAGATAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTGGTTGAGCAAGATACGGCATCAGAATATCATAAAACTTATGGGTTATTGTATTCATGGTGAATCGAGGTTTCTTGTTTATGAACTGATGGAGAATGGATCTCTGGAAACTCAATTGCATGGGCCTAATCGAGGGTCATCTTTAACTTGGTATCTCAGGTTAAGAATTGCTGTTGATGTTGCCAGAGCATTAGAATATCTCCACGAGCACTGCAATCCTCCTGTGGTTCATAGAGATTTAAAATCTTCCAATGTTCTTCTGGATTCTAACTTTAGTGCCAAGTTGTCAGATTTTGGATTCGCTATGGTTTCTGGAATGCAACACAAGAACATGAAGATGTCAGGAACCTTAGGATATGTGGCCCCTGAGTACATTTCACATGGTAAACTAACTGACAAGAGCGATGTCTATGCTTTTGGGGTTGTCCTTCTAGAACTCCTAACGGGAAGAAAACCCATGGAGAACATCACCTCAAACCAATATCAATCCCTTGTATCATGGGCCATGCCTCAGCTAACTGACAGATCGAAGCTTCCAAGTATTCTTGATCCTGTTATCAGAGACACGATGGATTTGAAGCATTTGTATCAGGTTGCTGCAGTGGCTGTACTCTGCGTGCAAGCAGAACCAAGTTATAGGCCACTAATAACAGACGTGTTGCACTCTCTCATCCCTTTGGTACCCGTTGAGCTTGGAGGGTCTCTAAGAGTTACAGAACCAATCAGCTCAGAGAATTCTCATTGA 1287 0.4149 MNPLVLFVPIWVLGISLSSPILHAATSISVSQNAQAESPGIQEVRAVHHQNLNKGILIALVGCSALLGGIFLIIFCVWFRRHKHVKCSKSKNQETTEAAKGETLSSVNAKHNYSRMADKKSSVAIFDYQLLEAATNSFSTSNIMTESGSRIVYRASFDEHFQAAVKKADSDADREFENEVSWLSKIRHQNIIKLMGYCIHGESRFLVYELMENGSLETQLHGPNRGSSLTWYLRLRIAVDVARALEYLHEHCNPPVVHRDLKSSNVLLDSNFSAKLSDFGFAMVSGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKPMENITSNQYQSLVSWAMPQLTDRSKLPSILDPVIRDTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPISSENSH 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00057 428 PANTHER OS01G0750732 PROTEIN 32 408 - -
Spst5g00057 428 SUPERFAMILY Protein kinase-like (PK-like) 113 404 IPR011009 -
Spst5g00057 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Spst5g00057 428 FunFam probable receptor-like protein kinase At1g80640 211 409 - -
Spst5g00057 428 Gene3D Phosphorylase Kinase; domain 1 97 210 - -
Spst5g00057 428 Gene3D Transferase(Phosphotransferase) domain 1 211 409 - -
Spst5g00057 428 Pfam Protein kinase domain 162 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00057 428 SMART serkin_6 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00057 428 ProSiteProfiles Protein kinase domain profile. 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00057 Spst-Chr5 672820 676069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00057 7 350 Receptor kinase-like Gene Family AT1G80640 46.721 3.67e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Spst5g00057 Pkinase 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00057 - - gmx:100811188 759.599