Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst5g00038 | ATGCCGTCAAGACCCTTCCCTCCCACTAGTCCCAGCAAAACCAAGACCCTCTTCCTAGCACTCACCATTTCAGCTTGTGTTGTGATTCTCTGCTCAATCCTCTACTTCCTCTACCATCTGTGGCTTTCTCTTGTTCACAGAGCTAAGACTATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGGTTCTCCTACAAAGATTTAAAACAAGCCACCAATGACTTTGCCACTGTCAATGTAATTGGCAAAGGCGGCTCTGGCACTGTTTTCAGAGGAGTACTTAAAGACGGCAAGTTAATTGCCATCAAGCGCCTGGACGCATTGTCTTTGCAGTCAGAGAGAGAGTTTCAAAACGAGCTGCAGATTCTTGGAGGGTTAAGGTCACCATTCTTGGTGACCCTGTTGGGTTACTGTGTGGAAAAGAACAAAAGAGTGCTGGTGTATGAGTATATTACCAACAGAAGCTTGCAGGAGTCCCTCTTCGGAGATGGGGGTTTGAGTTTGAGTTGGGAGAGCAGGTTTTGTATAATATTGGATGTTGCTAGAGCTTTGGAGTTCTTGCACCTTGGATGTGATCCTCCAGTGATCCATGGTGATATCAAGCCAAGCAATGTTCTGCTTGATGCCGACTGGCGTGGGAAGATCTCTGACTTTGGCTTGTCAAGGATAAAGGTGGAGGGTGAGTTTGGTGTTGACTTGTTTAGCCAAGACCTGGGGAGGAGCCAGGATCTATGGAAAAGCCAAGAGCTTTCAGGTAATTTGACTAATTTGACTGCAGAAACTCCTGCTATTGGTACTCCAGTTGAGAGTGTTAGTGAAGTAGATTTTGCTCTAGCTTTGCAAGCTTCTTCTTCATCTAAAAATAGTAGGACTTGCTTTAATGTTAAAGCTTTGAACTTGAATTCTTTGAATTATAATGCCAATATTGCCAGTGAAAGTGAAATCAGGAGTGTAAATGCAAAGGGTAAGGAAATTTCAGCTTTGGATAGGGATGATTGGAATGGTAAGTTCTTTCCTTATGATGATGAGCTTTCTAGCATTGATTATAGTAAGGAGTTAACAGTGAATGCTTCTCCTCTGGTGGATGATGAGAAGGCAAATGGGACACAATGGGGAAAGGACTGGTGGTGGAGACAGGATGGAAGCGGAGAGTTATGTAGTAAAGACTACGTTATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACCCTGATTGGGATCATGGTAAAAACAATGTTCATGAGAAAGTGGAGTTGGAAAATTCAGGTCCAAAGGATAAAGACCATGATGCAATTGCACCCCAATCCCAGGTGTTAGGAATAGGACACAATACTACAGATAATGGTGTTGAGAAAAAAGACTCAAGGGGAAAGAAAAATCACAAAAAGAAACACCGGAAGATGCAAGAGTGGTGGAGAGAAGAGCATCTCGCTGAATTAAGCAAGAAGACCAATAAACTGAAAAATCTTCATACGAAATGGAAGAAAGGCATGAAAGTGCCCCATTTTGGTTTGGGTAGAAGGTTTTATCTTTGCAGGCGTAGTAAGTATGGAGAGGAAGGTGAGGATGAATGTGATCAAAATGGGGAGTTTAGCTTCAGAAGAGGCTGGAAGAAGAAAAGTACTCGTTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTCAGCAGCACAACTAGCATGCGAGGGACACTCTGTTATGTGGCACCAGAATATGGAGGGTGTGGATTCTTGATGGAGAAAGCTGATATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCAGGTAGGAGGCCCTTACATGTTCTTGCATCACCCATGAAGCTAGAGAAAGCTAACCTAATAAGCTGGTGTAGACACTTGGCTCAAACTGGTAACATTTTAGAACTAGTGGATGAGAGATTGAAAGAAGACTACAACAAGGACCAAGCAAGCCTGTGTATCAATTTGGCCCTCACCTGCTTACAGAAAATTCCTGAGTTGAGGCCAGATATTGGGGATATTGTTAAGATTTTGAAGGGTGAGATGGATCTTCCACCACTTCCATTTGAGTTCTCCCCTTCTCCACCTTCCAAACCATACGGAAAATCAAGAAGAAAACAGAAGAGCACTGCAGAATAG | 2139 | 0.4329 | MPSRPFPPTSPSKTKTLFLALTISACVVILCSILYFLYHLWLSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNDFATVNVIGKGGSGTVFRGVLKDGKLIAIKRLDALSLQSEREFQNELQILGGLRSPFLVTLLGYCVEKNKRVLVYEYITNRSLQESLFGDGGLSLSWESRFCIILDVARALEFLHLGCDPPVIHGDIKPSNVLLDADWRGKISDFGLSRIKVEGEFGVDLFSQDLGRSQDLWKSQELSGNLTNLTAETPAIGTPVESVSEVDFALALQASSSSKNSRTCFNVKALNLNSLNYNANIASESEIRSVNAKGKEISALDRDDWNGKFFPYDDELSSIDYSKELTVNASPLVDDEKANGTQWGKDWWWRQDGSGELCSKDYVMEWIGSQICPSNPDWDHGKNNVHEKVELENSGPKDKDHDAIAPQSQVLGIGHNTTDNGVEKKDSRGKKNHKKKHRKMQEWWREEHLAELSKKTNKLKNLHTKWKKGMKVPHFGLGRRFYLCRRSKYGEEGEDECDQNGEFSFRRGWKKKSTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQTGNILELVDERLKEDYNKDQASLCINLALTCLQKIPELRPDIGDIVKILKGEMDLPPLPFEFSPSPPSKPYGKSRRKQKSTAE | 712 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst5g00038 | 712 | FunFam | Receptor-like serine/threonine-protein kinase At4g25390 | 535 | 684 | - | - | |
Spst5g00038 | 712 | ProSitePatterns | Protein kinases ATP-binding region signature. | 82 | 104 | IPR017441 | GO:0005524 | |
Spst5g00038 | 712 | Coils | Coil | 474 | 494 | - | - | |
Spst5g00038 | 712 | MobiDBLite | consensus disorder prediction | 441 | 469 | - | - | |
Spst5g00038 | 712 | FunFam | putative receptor-like protein kinase At1g80870 | 152 | 263 | - | - | |
Spst5g00038 | 712 | SUPERFAMILY | Protein kinase-like (PK-like) | 56 | 698 | IPR011009 | - | |
Spst5g00038 | 712 | SMART | serkin_6 | 76 | 677 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst5g00038 | 712 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | - | - | |
Spst5g00038 | 712 | Gene3D | Transferase(Phosphotransferase) domain 1 | 499 | 684 | - | - | |
Spst5g00038 | 712 | Gene3D | Transferase(Phosphotransferase) domain 1 | 152 | 263 | - | - | |
Spst5g00038 | 712 | PANTHER | OS07G0586332 PROTEIN | 10 | 707 | IPR044576 | - | |
Spst5g00038 | 712 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
Spst5g00038 | 712 | ProSiteProfiles | Protein kinase domain profile. | 76 | 687 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst5g00038 | 712 | FunFam | Receptor-like serine/threonine-protein kinase At4g25390 | 45 | 151 | - | - | |
Spst5g00038 | 712 | MobiDBLite | consensus disorder prediction | 688 | 712 | - | - | |
Spst5g00038 | 712 | Gene3D | Phosphorylase Kinase; domain 1 | 45 | 151 | - | - | |
Spst5g00038 | 712 | Pfam | Protein kinase domain | 78 | 226 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst5g00038 | Spst-Chr5 | 542120 | 544258 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst5g00038 | 546 | 678 | Receptor kinase-like Gene Family | AT3G58690 | 31.343 | 2.51e-13 | 70.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XI | Spst5g00038 | Pkinase | 5.1e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst5g00038 | - | - | gmx:100807432 | 1293.49 |