Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00018 ATGCATTCCACCATTTTCATGAGGTGTCTTTTTTTCTTGTCTTGCTTCTTTTACGCGGCCTCTGCACTCAACTCCGATGGGGTCACCCTTTTGTCACTCATGAGGCGCTGGACATTCGTTCCTCCTTCCATAAACACCACCTGGCTTGCCTCTGACTCCACTCCATGCTCCTCCTGGGTGGGAGTTCAATGTGACCATGCCCACCATGTCGTCTACCTTAACCTCACTGGTTATGAGATTACTGGCCCATTAGGTCCTGAAATTGGAAATATTTCTCGTCTACACTACTTAGACCTGACAGATAACAACCTTAATGGCCCAATACCTCACTCCTTCGAAAATTTGCACAACCTCCAGTTTCTCAGCCTTGCTCAAAATCAACTATCTGGTGAAATCCCGCATTCCTTGACTCAAATCCCTCGACTGTATTTGGTTGATCTATCACATAATAGTTTAAACGGTTCCATCCCCACGAGCATTGGGAACATGTCTGAGCTCTTGCAGTTGTATCTTCAGAATAACCAGTTGTCTGGGACAATTCCCTCATCCATTGGGAATTGCAGTAAATTACTAGAATTGTATCTGGATACAAATCAGTTGGAGGGTATCCTGCCGCAGAGTCTAAATAATCTTAATCATCTTGCTTATTTTGATGTCGCCAGGAATAGACTTACAGGTGCAATTTCTTTGGGTTCCAGCAGTTGTAAAAATTTAGTAGTTTTGGATATCTCGTTCAATGACTTTGGTGGAGGCCTTCCCTTAGGTTTGGGGAACTGTACTGGTTTATCAGCATTTGTAGCCGTGAACTGCAATTTGGTTGGGAGTATTCCACCCTCCTTTGGCCTTCTGACCCAGCTTTCTATTCTATACCTTCCACAGAACCATTTATCTGGAAGAATACCTCCAGAAATTGGCAACTGCAAGTCTTTGACAGAGTTGCAGCTGTATTCCAATCGACTTGAGGGAAACATTCCAAGTGAATTGGGAAAGCTAAGAAAACTAGTGGATTTGGAATTGTTTTCAAATCAACTGACTGGTGAAATTCCACTCAGCATCTGGAAGATTAAAGGTCTTGAGTATCTGATTCTGTATAATAATAGTCTTTCTGGAGAATTGCCATTGGAGATTACGGAGCTGAAGCAAGTGAAAAACATCTCATTGTTCAACAACCAGTTTTCCGGGGTCATACCTCAAAGCTTGGGAATTAACAGCAGTTTAGTTCTGTTGGACTTCACAAATAATAAATTCACTGGCAACATTCCACCAAATCTGTGTTTTGGTAAGAAGTTAAATATCCTGAATTTGGGCATCAATCAACTTCAAGGTAGCGTACCTCCTGATGTTGGGAGCTGTACAACCCTTGGAAGGTTAATTCTCAAACAAAATAATTTGACTGGATCTCTTCCTCGTTTTGAAAGCAACCCAAATCTCGTTTACATGGATATTGGCAACAACAAAATCCATGGATCAATTCCATCAAGTTTGGGAAACTGCAGACGTATCACTGACTTAACTTTGTCCATGAACAAGTTTACAGGGTCTATACCCTCAGAGCTAGGGAACCTTGTGAATCTTCAGACTTTGAATCTCTCTCACAACAACTTGGAAGGTCCTTTGCCCTCTCAGCTATCAAAGTGCACCAAAATGGACAGGTTTGATGTTGGATTCAATTTCCTAAATGGTTCATTGCCATCAAGTCTGCAGAGATGGACAAGGCTAACCACATTAATTTTGAGCGAGAATCACTTTAGTGGGGGCCTCCCAGCTTTTTTGTCGGACTTTCAAATGATTTCTGAACTACAACTTGGTGGCAATCTGTTTGGAGGCAAAATTCCTAGATCGGTCGGAGCAATGCAGAGTTTGCTCTATGGCTTGAATCTAAGTTCAAATGTTTTGACTGGTGAAATTCCTGTACAGATTAGGAACCTGAAAAAGTTGCAAACCCTAGATCTGTCTCATAACAATTTGACAGGGAGCATAGAAGTTCTTGGTGAACTCCTCTCCTTAGTGGAACTCAATATTTCAAACAATTCTTTTCGTGGTCTTGTACCAAAGAGGCTGATGAAGTTGCTTAATTCTTCGTTGTCATCATTCTTGGGCAATGCTGGCCTATGCATCAGATGTTCAGCATCAGACGGCACGGCTTGCACTGAAAGAAGCTCTATTAAATCATGTGATGACAAATCTACTAAGCAGAAAGGCCTCAGTAAAGTTGAAATTGTGATGATAGCTCTTGGGTCCTCCATATTTGTTGTTTTATTGTTGATGGGATTAGTTTGTATTGTTGTTTTTGGCAGAAAAGCTAAGCAGGAAAACCATATCTCTTCTGACGAGGGTTCTTCATCCCTTCTGAACAAAGTCATGGAGGCTACAGAAAACCTAAATGATAAGTATATTATTGGTAGAGGAGCCCATGGAGTTGTTTATAAAGCTCTGATAAGTCCAGACAAAGCTTTTGCTGTGAAGAAGATAGGATTTGCTGCTAGCAAAGGTAAAAACTTGAGCATGGTCAGAGAAACTCAAACCCTTGGGAAAATCAGGCATCGAAATCTGCTCAAATTGGAAGCCTTTTGGTTGAGAAAAGACTGTGGTCTAATTTTGTACAGCTACATGGCAAATGGAAGTCTCCATGATGTTTTGCATGAAAAGAGACCACTACCAACCTTAAAGTGGACTGTCCGGTACAAGATAGCTGTTGGAATAGCTCACGGGTTGGCTTATCTCCACTACGACTGTGAACCTCCCATAGTGCACCGAGACATCAAGCCCATGAATATACTTCTAGACTCTGATATGGAGCCTCACATTGCTGACTTTGGTATTGCTAAACTTTTGGATCAGTCTTCTTCAGCCTCAAATCCTTCCATTTTTGTGACGGGTACAATTGGTTATATTGCTCCAGAGAATGCTTATACAACAGCAAATAGTAGGGAGTCTGATGTATACAGTTACGGGGTTGTTTTGCTTGAGCTGATAACCAGGAAGAAGGCAGGAACAGATCCTTCATACATGGAGGGTACTGATGTCGTGGATTGGGTTAGGTCTGTGTGGAGTGACACAAGAGAAATCCATCAAATTGTTGATTCAATACTTTCAGGCGAACTTCTAGATACCCATATAATGGAAAACATTACCAAAGTGCTTATGGTTGCTTTGAGATGTACTGAGAAAGATCCACGCCAGAGGCCAACTATGAGAGATGTTGTTTTTGAATTATCAGATGCTAATCCAGGGACAAGAAATACAAAGGACTAA 3255 0.4154 MHSTIFMRCLFFLSCFFYAASALNSDGVTLLSLMRRWTFVPPSINTTWLASDSTPCSSWVGVQCDHAHHVVYLNLTGYEITGPLGPEIGNISRLHYLDLTDNNLNGPIPHSFENLHNLQFLSLAQNQLSGEIPHSLTQIPRLYLVDLSHNSLNGSIPTSIGNMSELLQLYLQNNQLSGTIPSSIGNCSKLLELYLDTNQLEGILPQSLNNLNHLAYFDVARNRLTGAISLGSSSCKNLVVLDISFNDFGGGLPLGLGNCTGLSAFVAVNCNLVGSIPPSFGLLTQLSILYLPQNHLSGRIPPEIGNCKSLTELQLYSNRLEGNIPSELGKLRKLVDLELFSNQLTGEIPLSIWKIKGLEYLILYNNSLSGELPLEITELKQVKNISLFNNQFSGVIPQSLGINSSLVLLDFTNNKFTGNIPPNLCFGKKLNILNLGINQLQGSVPPDVGSCTTLGRLILKQNNLTGSLPRFESNPNLVYMDIGNNKIHGSIPSSLGNCRRITDLTLSMNKFTGSIPSELGNLVNLQTLNLSHNNLEGPLPSQLSKCTKMDRFDVGFNFLNGSLPSSLQRWTRLTTLILSENHFSGGLPAFLSDFQMISELQLGGNLFGGKIPRSVGAMQSLLYGLNLSSNVLTGEIPVQIRNLKKLQTLDLSHNNLTGSIEVLGELLSLVELNISNNSFRGLVPKRLMKLLNSSLSSFLGNAGLCIRCSASDGTACTERSSIKSCDDKSTKQKGLSKVEIVMIALGSSIFVVLLLMGLVCIVVFGRKAKQENHISSDEGSSSLLNKVMEATENLNDKYIIGRGAHGVVYKALISPDKAFAVKKIGFAASKGKNLSMVRETQTLGKIRHRNLLKLEAFWLRKDCGLILYSYMANGSLHDVLHEKRPLPTLKWTVRYKIAVGIAHGLAYLHYDCEPPIVHRDIKPMNILLDSDMEPHIADFGIAKLLDQSSSASNPSIFVTGTIGYIAPENAYTTANSRESDVYSYGVVLLELITRKKAGTDPSYMEGTDVVDWVRSVWSDTREIHQIVDSILSGELLDTHIMENITKVLMVALRCTEKDPRQRPTMRDVVFELSDANPGTRNTKD 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00018 1084 Gene3D Ribonuclease Inhibitor 234 470 IPR032675 -
Spst5g00018 1084 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 428 714 - -
Spst5g00018 1084 SMART serkin_6 794 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00018 1084 ProSiteProfiles Leucine-rich repeat profile. 524 545 IPR001611 GO:0005515
Spst5g00018 1084 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 459 1073 - -
Spst5g00018 1084 Pfam Protein kinase domain 797 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00018 1084 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Spst5g00018 1084 SUPERFAMILY L domain-like 26 298 - -
Spst5g00018 1084 Pfam Leucine rich repeat N-terminal domain 24 65 IPR013210 -
Spst5g00018 1084 SUPERFAMILY L domain-like 379 709 - -
Spst5g00018 1084 Gene3D Phosphorylase Kinase; domain 1 764 870 - -
Spst5g00018 1084 SMART LRR_typ_2 163 187 IPR003591 -
Spst5g00018 1084 SMART LRR_typ_2 643 666 IPR003591 -
Spst5g00018 1084 SMART LRR_typ_2 115 139 IPR003591 -
Spst5g00018 1084 SMART LRR_typ_2 522 546 IPR003591 -
Spst5g00018 1084 SMART LRR_typ_2 283 307 IPR003591 -
Spst5g00018 1084 SMART LRR_typ_2 188 210 IPR003591 -
Spst5g00018 1084 FunFam Leucine-rich receptor-like protein kinase family protein 136 230 - -
Spst5g00018 1084 Gene3D Transferase(Phosphotransferase) domain 1 871 1083 - -
Spst5g00018 1084 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 761 870 - -
Spst5g00018 1084 SUPERFAMILY L domain-like 268 369 - -
Spst5g00018 1084 FunFam Serine/threonine-protein kinase-like protein CCR4 871 1084 - -
Spst5g00018 1084 Pfam Leucine rich repeat 92 152 IPR001611 GO:0005515
Spst5g00018 1084 Pfam Leucine rich repeat 166 224 IPR001611 GO:0005515
Spst5g00018 1084 Pfam Leucine rich repeat 475 535 IPR001611 GO:0005515
Spst5g00018 1084 ProSitePatterns Protein kinases ATP-binding region signature. 800 823 IPR017441 GO:0005524
Spst5g00018 1084 Gene3D Ribonuclease Inhibitor 28 139 IPR032675 -
Spst5g00018 1084 FunFam Leucine-rich repeat receptor-like kinase 27 135 - -
Spst5g00018 1084 Gene3D Ribonuclease Inhibitor 140 233 IPR032675 -
Spst5g00018 1084 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Spst5g00018 1084 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 326 424 - -
Spst5g00018 1084 SUPERFAMILY Protein kinase-like (PK-like) 780 1071 IPR011009 -
Spst5g00018 1084 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 232 324 - -
Spst5g00018 1084 Gene3D Ribonuclease Inhibitor 471 725 IPR032675 -
Spst5g00018 1084 ProSiteProfiles Protein kinase domain profile. 794 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00018 1084 PRINTS Leucine-rich repeat signature 525 538 - -
Spst5g00018 1084 PRINTS Leucine-rich repeat signature 643 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00018 Spst-Chr5 385028 388386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00018 14 1075 Receptor kinase-like Gene Family AT1G73080 51.639 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst5g00018 Pkinase 5.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00018 - - gmx:100778035 1675.99