Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00015 ATGGCTGCCAATGGTGGGGTAGGGGGGTTTGCTGTCAGTGACTATCGGCAATCTCTGCAGTTTCAGAACTTGAATGCAGAAAAACAAAATATAAAATTAGAAGTCATTAGAGGTGGCAGAACAATACAAATATCGATATTTGATATTGTTGTTGGTGATCTAGTGCCCCTTAAAATAGGAGATCAGGTTCCCGCCGATGGAGTTGTAATCACTGGTCATTCTCTTGCCATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTATTCACAAGGATCAAAAAGCACCTTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGCTATGCTGGTAACTGGTGTTGGTATAAATACTGAGTGGGGACTGTTGATGGCAAGTATCTCAGAGGATACTGGAGAAGAGACTCCATTACAGGTTCGTTTGAATGGAGTGGCAACTTTTATTGGCATAGTGGGGCTTACTGTAGCTGTTTGTGTCCTTGCAGTCCTCTTGGGGAGGTAA 507 0.428 MAANGGVGGFAVSDYRQSLQFQNLNAEKQNIKLEVIRGGRTIQISIFDIVVGDLVPLKIGDQVPADGVVITGHSLAIDESSMTGESKIIHKDQKAPFLMSGCKVADGVGAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLAVLLGR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00015 168 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 166 IPR023298 -
Spst5g00015 168 PANTHER CATION TRANSPORTING ATPASE 11 166 - -
Spst5g00015 168 Gene3D - 11 106 - -
Spst5g00015 168 Gene3D - 107 168 - -
Spst5g00015 168 Pfam E1-E2 ATPase 30 166 - -
Spst5g00015 168 FunFam Calcium-transporting ATPase 11 130 - -
Spst5g00015 168 SUPERFAMILY Calcium ATPase, transduction domain A 31 127 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00015 Spst-Chr5 360621 363901 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00015 11 154 Primary Pumps ATPases AT3G21180 88.194 1.81e-86 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00015 K01537 - gmx:100802659 278.1