Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00014 ATGAGCTCGACCACGCGTGGCTCCACCTCCTCCTCCAATGGCCTTCTCACCGTCACCATTACCGGCAGCCACACTGAATCTGGTGACCCTGTCGCCATCAACAACGACGACGACGACTTGGTCGTGGATCCCGACGATCCTTTCGATATTACGCATACCAAGAATGCACAGCCCGAGACCCTCAAGCGTTGGAGACAAGCATCCTTGGTGCTCAATGCGTCCAGGCGTTTTAGATACACTCTTGACTTGAAAAAGGAAGAGGAGAAAGACCATAAGAAAAGCATGATTAGATCCCATGCACAAGTCATTAGAGCAGCTTTGCTTTTCAGATTGGCTGGTGAACGGGAACTAGTGACAAGTACAGCAGCACTGGAAGCCCCAACTCCAGTTGGCGAGTACACAGTTGAGCTCGAACAACTTGTTTCAATGACTAAGAATCAGAATATTTCTGCTTTACAACAATTTGGAGGGGCAAGTCTTCTTCAATGTTTCTTTGTTAAAGGCTTATCAAATTTACTCAAGTCAATTCCCGATAAAGGGATTAGCGGAGATGATGTAGATCTTGTAAAGAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAGGGGAGAAGTTTCTGGAGGTTTCTATGGGAATCTTGGCAAGATCTTACTCTTATAATATTGATTATAGCAGCGGTGGTGTCATTGATACTTGGCATAAAAACAGAGGGCCTCGAAGAAGGGTGGTACGACGGAGGAAGCATTGCTTTCGCTGTTTTTCTTGTAATTATAGTTACAGGTAATGAACAGATATTGATTGAATAA 813 0.4428 MSSTTRGSTSSSNGLLTVTITGSHTESGDPVAINNDDDDLVVDPDDPFDITHTKNAQPETLKRWRQASLVLNASRRFRYTLDLKKEEEKDHKKSMIRSHAQVIRAALLFRLAGERELVTSTAALEAPTPVGEYTVELEQLVSMTKNQNISALQQFGGASLLQCFFVKGLSNLLKSIPDKGISGDDVDLVKRKNAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLILGIKTEGLEEGWYDGGSIAFAVFLVIIVTGNEQILIE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00014 270 Gene3D - 189 213 - -
Spst5g00014 270 Pfam Ca2+-ATPase N terminal autoinhibitory domain 45 88 IPR024750 GO:0005516
Spst5g00014 270 Gene3D - 214 261 - -
Spst5g00014 270 MobiDBLite consensus disorder prediction 1 38 - -
Spst5g00014 270 PANTHER CATION TRANSPORTING ATPASE 100 262 - -
Spst5g00014 270 Pfam Cation transporter/ATPase, N-terminus 167 231 IPR004014 -
Spst5g00014 270 SMART Cation_ATPase_N_a_2 165 236 IPR004014 -
Spst5g00014 270 Gene3D - 58 110 - -
Spst5g00014 270 MobiDBLite consensus disorder prediction 1 30 - -
Spst5g00014 270 SUPERFAMILY Calcium ATPase, transmembrane domain M 168 263 IPR023298 -
Spst5g00014 270 FunFam Calcium-transporting ATPase 56 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00014 Spst-Chr5 358205 360333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00014 8 263 Primary Pumps ATPases AT3G21180 61.004 7.24e-100 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00014 K01537 - gmx:100802659 391.349