Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00004 ATGCGGCATGCAAATCATAAAGTATCGGCTAGAAAGGTAGGAGGAGGAGGAGGAAATGGAATAGTGGCAGTGGCTGTAGACAAGGATAAAGGAAGCCAATACGCTCTTAAATGGGCTGTTGATTCTCTGCTCGCCAGAGGTCAAACTGTTTTTCTCATCCACGTCTTGCACGGGACATCCTCACCTGTTCCCACAGGGGGTAGCGAGGCCATCATATGTAACATCACCGATTCATCTTCATCTCTGCAGAGATTCCAACTTGATAACACTACCAAGGATTTGTTTCTCACTTGCCATTGCTATTGTACACGCAAAGATATACAATGCCTTGATATCCTACTCGAAGACAATGATGTTGTGAAAGCAATAACAGAATATGTCTCTTATGCTGCAATTGAGAACTTGGTGGTTGGTTCAACATCCAGGCATGGGTTTATTCGATTTAAGTCATCATCAACTGCATCAAGTAGCATATCAAAGGGGGTGCCGGACTTTTGTACCGTGTTTATCATTTCAAAGGGAAAAATCTCCTCAGTTCGGAATGCTACTCGTCCAGCCGCACATACATCCCCACTTCTGAGCCATATACGTAATCTAAACAAGGACGAAAATCAACCTGAAGTACCCTTCAGAAATAAGAATACAGGAGAAAGGACGTCAATCAAACCTCAGAACTGGCTTGATGAATCTATTACGTCTCCATTTCCAAGGGGAAGACCGAGTAGAATATCATTGGACTTCCCAGAATCAGATACGGAAATATCATTTGTAAGCTCCGAGAGGCCTAGCACTGCTCGTTCATCCTCCGTTTATGACTATATTGAGGCAGGCCGAACTTCTCGAGTTTCTACTAGTTCAGATCATAGCTATGGATCGACCCGATTAGGACTCAAATTCAATGACCCCAATTCACCCGATACGTCATTCTCACATGAAAGCAATGGAACATCATTCACGTATTCATCACAGAGCTTGGATGAAGCAGCAGAAGCTGATATGAGGAGGCTGAAACTTGAGTTAAAGCAAACGATGGAAATGTACAGTACAGCATGCAGAGAAGCACTAACAGCTCAGCAGAAGTTAATGGAGTTGACCCACTGGAGAATTGAGGAAGAAAAAAAATTAGAAGAGGCACGATTGTCTGAGGAAGCTGCGCTAGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCATCTAAGAAAATTGCCGCGGTTGAATCACATAGAAGAGCGAGTGCTGAAGTTAAAGCTCTCAAAGAAGCAGAGGAAATGAGGAAGCTTTTGGACAATCTAGCGCAAACTGATGTAAGATATAGGAGATACGGTATCGAGGAGATTGAAGTAGCCACTAACTTCTTTTCTGAATCCCAGAAAATCGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTATCCTTGATCACACTCCAGTTGCTGTTAAGGTTCTACGTCCAGATGCTGCTCAAGGGAGGACACAGTTTCAGCAAGAGATTGACATACTGAGCTGCATGCGACATCCAAACATGGTGCTTCTTCTAGGAGCGTGTCCAGAGTATGGCATACTGATTTATGAACATATGGCTAATGGAAGCTTAGAAGAATGCCTGTTTCACAAAAGGAAGAAGAATGTTCTGTCCTGGCAGCTGAGGTTCCGAATTGCTGCAGAGATAGCAACGGGCCTATTATTCCTTCATCAGACCAAGCCTGAACCTTTAGTACACCGTGATCTGAAACCAGCCAACATTTTGCTAGACCAGAATTATGTGAGTAAAATAGGCGATGTTGGATTGGCAAAGCTTCTCCCAGCAGTAGCTGAAAACGTAACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGCGTGAAGTCGGATGTTTATTCTCTGGGAATCATTTTTCTTCAATTATTGACAGGAAGGCCTCCAATGGGATTGGCTCACCGCGCCGGAGAGGCTTTAGAGAAGAACAGGTTTGAGGAAATGCTGGACCCATCTGTCACCGATTGGCCTCTTCAACAAGTCTTGTGCCTTGCGAAGATATCAATCAAGTGTGCGGAACTCAGGCGAAAAGACAGGCCAGACCTTGCCAAAGTAGTGTTGCCAGTGCTCGATAAACTGAGAGACTTTGCCGAAGAAAAATTGCCCATCATTTTGAGATGCACTGCACCTTCACCCAGTTACAGTGAAACTTTCCTGCAACAGGATATGATGAGTGACCCGCGGCTTGTACATTCCGTAGGCTCATCAGCTCCGTCAACGCCCACAGACTGA 2328 0.4454 MRHANHKVSARKVGGGGGNGIVAVAVDKDKGSQYALKWAVDSLLARGQTVFLIHVLHGTSSPVPTGGSEAIICNITDSSSSLQRFQLDNTTKDLFLTCHCYCTRKDIQCLDILLEDNDVVKAITEYVSYAAIENLVVGSTSRHGFIRFKSSSTASSSISKGVPDFCTVFIISKGKISSVRNATRPAAHTSPLLSHIRNLNKDENQPEVPFRNKNTGERTSIKPQNWLDESITSPFPRGRPSRISLDFPESDTEISFVSSERPSTARSSSVYDYIEAGRTSRVSTSSDHSYGSTRLGLKFNDPNSPDTSFSHESNGTSFTYSSQSLDEAAEADMRRLKLELKQTMEMYSTACREALTAQQKLMELTHWRIEEEKKLEEARLSEEAALAIAEKEKARCRAAMETAEASKKIAAVESHRRASAEVKALKEAEEMRKLLDNLAQTDVRYRRYGIEEIEVATNFFSESQKIGEGGYGPVYKCILDHTPVAVKVLRPDAAQGRTQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEHMANGSLEECLFHKRKKNVLSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDQNYVSKIGDVGLAKLLPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHRAGEALEKNRFEEMLDPSVTDWPLQQVLCLAKISIKCAELRRKDRPDLAKVVLPVLDKLRDFAEEKLPIILRCTAPSPSYSETFLQQDMMSDPRLVHSVGSSAPSTPTD 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00004 775 Gene3D HUPs 21 170 IPR014729 -
Spst5g00004 775 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Spst5g00004 775 PANTHER OS02G0152300 PROTEIN 22 760 - -
Spst5g00004 775 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 432 532 - -
Spst5g00004 775 SUPERFAMILY Protein kinase-like (PK-like) 444 718 IPR011009 -
Spst5g00004 775 Coils Coil 326 346 - -
Spst5g00004 775 CDD STK_N 21 174 - -
Spst5g00004 775 SMART serkin_6 460 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00004 775 Coils Coil 372 406 - -
Spst5g00004 775 Gene3D Transferase(Phosphotransferase) domain 1 533 736 - -
Spst5g00004 775 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 155 - -
Spst5g00004 775 Pfam Protein kinase domain 461 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00004 775 ProSiteProfiles Protein kinase domain profile. 460 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g00004 775 MobiDBLite consensus disorder prediction 281 321 - -
Spst5g00004 775 Pfam Universal stress protein family 21 156 IPR006016 -
Spst5g00004 775 Gene3D Phosphorylase Kinase; domain 1 439 532 - -
Spst5g00004 775 FunFam Os07g0541700 protein 533 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00004 Spst-Chr5 239084 242895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00004 18 737 Receptor kinase-like Gene Family AT1G78940 57.625 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Spst5g00004 Pkinase 6.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00004 - - gmx:100801601 1182.16