Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03527 ATGGGAACCTCTGATAACTATGATGTTCCTCCTCTACTTCAAGACCTTAAGGTGACCATCCACAACTCCTCCATGATTTTCCCATCCAGAGAGATTGACAGAAAGTCCTTGGTCTTGTCCAACATAGACAAGGTCCTCACCTTTGATGTGGAAACGGTTCACTTCTTTGGTGCCCATAAAGATTTTCCTCCCCATGTTGTCACTGAGAGGCTCAAGAATGCCCTAGAGGATGCCCTTGTGGTTTATGACTTCTTGGGTGGAAGGTTGAAGCTCAACCTTGAAACCAAAAGGTTGGAAATAGATTGTACCCCAGAGGGGGCAGGGTTTGTGGTGGCTTCCAGTGAGTACAAACTGGATCAGATAGGGGATTTGGATTATCCACATCCAGCTTTTGCACAATTAGTGCAAAAGAACAAGGATTTTCTCAAAGAGGGTGATGATCCACTGTGTGTTGCCCAGATAACATCCTTCAAGTGCGGTGGTTTTGCAATTGGCATCTCCACAAGCCACACCACCTTTGATGGCCTCAGCTTCAAAACCTTCCTGGACAACGTTGCTTCCATAGCTGCTAAAAAGCTCTTGGCGGTGAGGCCCTGCCACGATAGACACCTCCTGGCTGCGCGATCCCCACCACGTGTCACCTTCCCCCACCCCGAGATGCTCAATCTCAACGACCTCCCCAAGTCCAACATCTTTGAAGCCTCAACCGAACAGCTTCACTTCAAGGTTTTCAAACTCACCTCAAACCACATCACAAAGCTCAAGGAAGAGGCCAAAAATTCAATTTCTGGTGACACAACCACACGCGTCACAGGCTTTAACGCTATCACTGCCCACATATGGAGGTGTAAAGCCCTATCATGTGATGATGATGGTAATAATAACCCTAACAGGTCATCAACTATTCTCTATGCTGTGGATATACGTTCGAGGTTGGACCCTCCCTTGCCAAAATCTTACACGGGTAACGCAGTGTTAACGGCTTATGCGACGGCCACGTGTAGGGAGATAGAACAATGGCCCTTCATGAGGTTGGTTCAAATGGTGTGTGAGGGTGCGTCTAGGATGACAAATGAGTACGCAAGGTCGATCATTGATTGGGGAGAGATCAACAAAGGGTATCCAAATGGGGAGGTTTTGGTCTCATCATGGTGGAGATTGGGTTTTGAGGAGGTGGACTATCCATGGGGGAAGCCTAAGTATTGTTGCCCTGTGGTGTACCACAGGAAGGATATTGTTCTGTTGTTTCCTCCTGTTGATGGTGGAGGTGATGGGGTGAGTATTATTGTGGCTCTTCCTCCTAAAGAAATGGAAAGATTCTATGGACTCTTCAATAAGTTCTTGGGTGTTTGA 1353 0.473 MGTSDNYDVPPLLQDLKVTIHNSSMIFPSREIDRKSLVLSNIDKVLTFDVETVHFFGAHKDFPPHVVTERLKNALEDALVVYDFLGGRLKLNLETKRLEIDCTPEGAGFVVASSEYKLDQIGDLDYPHPAFAQLVQKNKDFLKEGDDPLCVAQITSFKCGGFAIGISTSHTTFDGLSFKTFLDNVASIAAKKLLAVRPCHDRHLLAARSPPRVTFPHPEMLNLNDLPKSNIFEASTEQLHFKVFKLTSNHITKLKEEAKNSISGDTTTRVTGFNAITAHIWRCKALSCDDDGNNNPNRSSTILYAVDIRSRLDPPLPKSYTGNAVLTAYATATCREIEQWPFMRLVQMVCEGASRMTNEYARSIIDWGEINKGYPNGEVLVSSWWRLGFEEVDYPWGKPKYCCPVVYHRKDIVLLFPPVDGGGDGVSIIVALPPKEMERFYGLFNKFLGV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03527 450 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 440 - -
Spst4g03527 450 Pfam Transferase family 16 440 - -
Spst4g03527 450 Gene3D - 14 221 IPR023213 -
Spst4g03527 450 Gene3D - 227 446 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03527 Spst-Chr4 76346910 76351108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03527 16 448 Monolignol Biosynthesis Gene Families AT5G48930 31.278 7.13e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03527 K13065 - gmx:100305576 759.599