Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03511 ATGGACATGGATGTTTGCCGAAATGTATCAGTTTCTACTGAGTTTCAGCAAGAGCTTCCCACCCTTGATGACCTTTTCTCTCATCAGAACATGGAAGTGGATTTTGGCATGGAATGGTTGTCGGTGTTTGTGGAAGACTGTTTTTCCAGTAGGCCAAGTTGCCTCTTGGCACAACCTGGTGTTCAAACCGCAAGCACTAGCACAAAGCCTTCAAGCATAATGCAAAGACCCCAACAAAGTTACTGTTCTTTGCAGAATTTTGCTGTGCCAGGGAAAGCCAGGAGCAAGAGGAAGAGGCTTTCAGCCCCTAGGACTAAACACACTCTAAGCACATGGTCACATGATTTCAGCACTGAAGTGTTGAGTTCTGACCCTCCTCTTTTGAAACAAGCCTATTGGTTGGCTGATAGTGAACTCATTGTCCCAAAGAAGAAGGATGAAGAGGGGATTGTGGTGAAGAAGGAGAAATTGGTGGAGTGTTGTGATGAGGGTGAAGTTAACAATAGTAGTAATAATAATAATGGACAGCACCCAATTCCCAGAAGGTGCACACATTGTCTGGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTGGGTCCAAAGACTCTATGCAATGCATGTGGTGTGAGGTACAAGTCTGGAAGGTTGTTGCCAGAGTATAGGCCAGCCAAGAGCCCTACTTTTGTTAGCTATTTGCATTCCAATTCACACAAGAAAGTCATGGAGATGAGAATGAGTGTTCTTCTACCTACAGAGAAGTAG 765 0.4549 MDMDVCRNVSVSTEFQQELPTLDDLFSHQNMEVDFGMEWLSVFVEDCFSSRPSCLLAQPGVQTASTSTKPSSIMQRPQQSYCSLQNFAVPGKARSKRKRLSAPRTKHTLSTWSHDFSTEVLSSDPPLLKQAYWLADSELIVPKKKDEEGIVVKKEKLVECCDEGEVNNSSNNNNGQHPIPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMSVLLPTEK 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03511 254 FunFam GATA transcription factor 171 253 - -
Spst4g03511 254 ProSiteProfiles GATA-type zinc finger domain profile. 181 213 IPR000679 GO:0006355|GO:0043565
Spst4g03511 254 SMART GATA_3 177 231 IPR000679 GO:0006355|GO:0043565
Spst4g03511 254 CDD ZnF_GATA 182 229 IPR000679 GO:0006355|GO:0043565
Spst4g03511 254 Pfam GATA zinc finger 183 217 IPR000679 GO:0006355|GO:0043565
Spst4g03511 254 ProSitePatterns GATA-type zinc finger domain. 183 208 IPR000679 GO:0006355|GO:0043565
Spst4g03511 254 PANTHER GATA TRANSCRIPTION FACTOR 20 248 - -
Spst4g03511 254 Gene3D - 173 244 IPR013088 GO:0006355|GO:0008270
Spst4g03511 254 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 179 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03511 Spst-Chr4 76016339 76017661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03511 37 245 C2C2-Gata Transcription Factor Family AT4G32890 42.593 1.53e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Spst4g03511 GATA 1.1e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03511 - - pvu:PHAVU_004G079200g 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g00434 1 5759128 5762596 Spst4g03511 4 76016339 76017661 PCT