Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03497 ATGCCCCAGAAGCGGAAGCAGCGCCCTCCTCCCATTGAAGATCCTCCAACTGTTTCCTCCTCCGAATCCGAGGAAGATGATGAGCAAGCGCCTTCCTCGCAACCGCATGCAGCACCAGCAGGAGTACAGGTTTCATCCTCTGGAGAGGAAGACGATTCTTCCCAAGAAGAAGACGATGAGCAACGTCCCATTCTCCCTGCTTCTGCACCCTCTAACCCACGCCCCAAATTCTCTTCCTCAGAGTCCGAATCCGACACTGACTCCGAACCCACCCGGGCTAAATCCAAACCCGCGGATCAGGCTCAGCGTGCCCCCGCGCCTGCGCAATCGGGATCCAAGCGCCCCGCCAGCGTTACTGAGCCGAAACGAGCGAAGAAGAAACCAACCGGCGCTCCTTCTTCCTCTGTACCTAATGACGAGGCGGTGGAGGACGGGAAGAAGTCCGGCGGCCAGGGGAAGATGTTCCAGCGGATCTGGAGCGATGAAGACGTGCTTGGCATTTTGAAGGGCATGAATGAGTTCATCGCAATGACAGGGCAAGATCCCTACAGGTACGTCGACGCTTTTCACAACTTCGTTAAGAAGTCACTCCACCTTGAGGCTTCAAGCAGCCAGCTGAAGGAGAAGATCCGACGCCTGAGGAAGAAGTTCGAGACTCTGGAGCAGAGAGAGAAGCAGGGGCAGGAGCCTCGGTTCGTGTCACCTCACGACGAGACTGTGTATGAAATCTCCAAGAAGATTTGGGGTGATGGAGCCAATGGACTGATAGAAAAGCCCAAGAAAGCCGCTGCTAAGACTCCGAAGAGGGAAGCTGTTAACAGTAGTGCCGCAAAACCCAAAGCCAAACCACCTTCGGAGCCATCAGTGCTGCCCTCGGATTTGCCGGAGTCGGGAAAGCATGATGGTAATGACGTGAGTTTGCTTTACCGCGAGATTTCTCGATTTCAAGAGCTGGATGAGGAAGACATGAAGAAGGGTCTGACTTTAATTGGAGAATCGAAGAGGAAGGAATTAGAGGGAAGGTGGAAGAACTTGCGACATGCTGAGATGGAACTGCTCGTCAATCGCTCTCTACTGATCGCGGAACAGATTAAATTAGTATCCGAAGCACTACATTCATCCTGTTAA 1128 0.5337 MPQKRKQRPPPIEDPPTVSSSESEEDDEQAPSSQPHAAPAGVQVSSSGEEDDSSQEEDDEQRPILPASAPSNPRPKFSSSESESDTDSEPTRAKSKPADQAQRAPAPAQSGSKRPASVTEPKRAKKKPTGAPSSSVPNDEAVEDGKKSGGQGKMFQRIWSDEDVLGILKGMNEFIAMTGQDPYRYVDAFHNFVKKSLHLEASSSQLKEKIRRLRKKFETLEQREKQGQEPRFVSPHDETVYEISKKIWGDGANGLIEKPKKAAAKTPKREAVNSSAAKPKAKPPSEPSVLPSDLPESGKHDGNDVSLLYREISRFQELDEEDMKKGLTLIGESKRKELEGRWKNLRHAEMELLVNRSLLIAEQIKLVSEALHSSC 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03497 375 MobiDBLite consensus disorder prediction 80 96 - -
Spst4g03497 375 Pfam Protein of unknown function, DUF573 155 249 IPR007592 GO:0006355
Spst4g03497 375 MobiDBLite consensus disorder prediction 1 156 - -
Spst4g03497 375 PANTHER BNAANNG10740D PROTEIN-RELATED 58 369 IPR007592 GO:0006355
Spst4g03497 375 MobiDBLite consensus disorder prediction 259 303 - -
Spst4g03497 375 Coils Coil 203 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03497 Spst-Chr4 75825214 75826341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03497 11 370 GeBP Transcription Factor Family AT1G61730 29.873 4.28e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Spst4g03497 DUF573 3.3e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03497 - - vun:114182157 419.083