Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03492 ATGGAAGAAAATTATGAGAAGTTGAGAAACCAAACCTACGGAACTAACTTGGATTCTTCCAACATGCTTTCTCAGCAATTGACACACCTATTTTATACTAACGTGACGTATCCCTTGATGGCTCCCTCAGACTCTGACTCTTTGGGACGCCATTCTCTTATTCCGAGCTTCCTCTATTCCTCTTCCTCGCCGGTTCATTCTCCGAGTGAGAAGCGCAGCATAGAGATGTTTTCGCCGTCGTACTACGCTGCTTGTGCCGTTGGAGGAGTGCTCAGCTGTGGCCTCACGCACACCGCCATGACGCCTCTTGACGTTGTCAAATGCAACATACAGGTCTCCTCTACCTCTCTCTATATCCACTCTTTTGCTTGCCACGCCATTGTGTTTTCGCATATTCAATTTTCCAACTGCAACCACGATTATAGCAACAGTTTAAAACCAGGTTACCATTTTCAGATTGATCCTGTCAAGTACAAGAACACCAGCACAGGATTTGGAGTCATGTTTAAGGAGCAAGGACTGAGGGGCTTTTTCCGCGGTTGGGCGCCTACCCTTCTTGGTTACAGCGCACAGGGTGCCTTCAAATATGGATTATATGAGTTCTTCAAGAAGTACTATTCTGACATAGCTGGTCCAGAGTATGCAGCCAAGTACAAGACATTGATTTACCTAGTCGGTTCAGCATCTTCTGAGGTGATTGCAGATGTTGCTCTTTGCCCATTTGAGGCTGTGAAGGTCAGAGTTCAAACTCAGCCTGGCTTTGCTAGAGGCTTACGTGATGGACTTCCAAAGATAGTCAGAACTGAAGGAGTCTCAGTGTTGTCGAAGGGAATTGTGCCTCTATGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTACGAGAACATAGTTGAGATGATCTATAAGCATGCCATGCCCAAACCAAAACATGAATGCAGCAATTCCCAGCAATTAGGTGTGAGCATTGTCGGTGGATACATGGCTGGTATATTGTGTGCCATTGTCTCTCATCCCGCTGATAACCTTGTCTCTTTCCTTAACAATTCCAAAGGGGCAACCGTTGATGAAGCTGTAAAGAAGCTTGGATTATGGGGTATGTTTACACGTGGTCTACCTCTTCGTATTCTTATGATTGGAACTCTAACAGGAGCACAATGGGGAATATATGATTCATTCAAAGTTTTTGTGGGGCTGCCAACCACTGGTGGTGTTGCTCCTGCTCTTCCTACTCCTGCTGCTTAG 1251 0.4556 MEENYEKLRNQTYGTNLDSSNMLSQQLTHLFYTNVTYPLMAPSDSDSLGRHSLIPSFLYSSSSPVHSPSEKRSIEMFSPSYYAACAVGGVLSCGLTHTAMTPLDVVKCNIQVSSTSLYIHSFACHAIVFSHIQFSNCNHDYSNSLKPGYHFQIDPVKYKNTSTGFGVMFKEQGLRGFFRGWAPTLLGYSAQGAFKYGLYEFFKKYYSDIAGPEYAAKYKTLIYLVGSASSEVIADVALCPFEAVKVRVQTQPGFARGLRDGLPKIVRTEGVSVLSKGIVPLWGRQVPYTMMKFASYENIVEMIYKHAMPKPKHECSNSQQLGVSIVGGYMAGILCAIVSHPADNLVSFLNNSKGATVDEAVKKLGLWGMFTRGLPLRILMIGTLTGAQWGIYDSFKVFVGLPTTGGVAPALPTPAA 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03492 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 205 IPR018108 -
Spst4g03492 416 Gene3D Mitochondrial carrier domain 81 399 IPR023395 -
Spst4g03492 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 319 398 IPR018108 -
Spst4g03492 416 FunFam Phosphate carrier protein, mitochondrial 215 400 - -
Spst4g03492 416 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 56 409 IPR044677 GO:0005315|GO:1990547
Spst4g03492 416 SUPERFAMILY Mitochondrial carrier 81 393 IPR023395 -
Spst4g03492 416 Pfam Mitochondrial carrier protein 82 207 IPR018108 -
Spst4g03492 416 Pfam Mitochondrial carrier protein 220 306 IPR018108 -
Spst4g03492 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 302 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03492 Spst-Chr4 75751226 75756072 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03492 45 410 Chloroplast and Mitochondria Gene Families AT3G48850 61.616 8.02e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03492 K15102 - gmx:100804257 559.681