Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03471 ATGGTAAGCATTTTATCTTCTTACACTGTCATTCCCAGCAAGCCTACACCACACTGTACTCTCTTGCTGAGTGAGTATGAGCAAATCAAAGCATTCACTCATGCCATCTTAATCTATGTCTACAAGCCAGATCCTCTCAATAAAAATATCTCCAAAATGGTTGAAATAATCAGAAACTCACTTCGCGATGTATTGGTCCATTATTACCCACTCGCTGGGAGGCTGCGCATGATAAAAGGCAGAAGATGGGAAATGGAGTGCAATGCAATGGGCGTGCAATTGTTGGAAGCAGAAGCTGCAGGAACACTCAACGACTACGGTGACTTTGAACCCAACGACACCATCAAACACCTTATTCCCAAACTTGATTACACCGAACCCATCGACAATCTGCCATTGTTTATGGCGCAATTAACAAGATTCTCCTGCGGTGGAGTCTGCATTGGCATTGCCACTTCCACTATTGTTGTCGACGGAATTTCTGCCACTCATTTCATCAATTCATGGGCGAAGTTGGCTCGAGAAGGCACCTTGGAAAAACACGACATGCCACTTTTGAACAAAGTGGTTATGAGTTCAGACTCGAAACCCCAATTTGAGCACAGAGAGTTCAAGTCGTTGCCACTCGTACTTGGCCACTCTGACAGCATGGAGGAGAGCAAGAAGGAGACAACGCTAACAGTAGTGAAACTCTCAAAAGAAATGGTGGAGAGCCTGAAGAAGAAAGCCAATCAAGACAATGAGGGTCGAGCTTATAGCAGATACGAGAGTATTTCAGCTCACATATGGCGATGTGTAGTGAAGGCACGTGATGGGGAGGACAATCAACCAACAGTTGTAAGCATTGCAGCTGGCGCTAGAAGCAGACTAAACCCACCTTTACCTTTAACCTACTTTGGGAATGTAACATATCCAACATTGACACCCACATGCCTAAGTCGTGATATTGTGTCAAAGCCCTTGAGCTATGTGGCACACAAGATCAGGGAAGCGATTGAGGTGTTAACAGACGAGTATTTAAGGTCAGGGTTTGCTTTCATTAGGAAGGAAAATGATGTAGGGTGGCTCAGGGACACATTTCTTGGGAACCCTAACCTTAGCATATGGAGCTGGTTGAGTAGCATGCCAATTTATGGGCCAGATTTTGGGTGGGGAAGGCCAGTGTACATGGGTCCGGGTGCTGTTAGAGGGGATGGGAGGGCATTCATTCTGCCAGGTGCAGGAGGAGACGGGTCAGTTTTAGTGGCCATTAGGTTGCAAACTGGTCACGTTGAAGCATTTAAGGAGTTCTTCCACAAGGACCTTAATATTTGA 1314 0.4581 MVSILSSYTVIPSKPTPHCTLLLSEYEQIKAFTHAILIYVYKPDPLNKNISKMVEIIRNSLRDVLVHYYPLAGRLRMIKGRRWEMECNAMGVQLLEAEAAGTLNDYGDFEPNDTIKHLIPKLDYTEPIDNLPLFMAQLTRFSCGGVCIGIATSTIVVDGISATHFINSWAKLAREGTLEKHDMPLLNKVVMSSDSKPQFEHREFKSLPLVLGHSDSMEESKKETTLTVVKLSKEMVESLKKKANQDNEGRAYSRYESISAHIWRCVVKARDGEDNQPTVVSIAAGARSRLNPPLPLTYFGNVTYPTLTPTCLSRDIVSKPLSYVAHKIREAIEVLTDEYLRSGFAFIRKENDVGWLRDTFLGNPNLSIWSWLSSMPIYGPDFGWGRPVYMGPGAVRGDGRAFILPGAGGDGSVLVAIRLQTGHVEAFKEFFHKDLNI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03471 437 Pfam Transferase family 1 431 - -
Spst4g03471 437 Gene3D - 1 206 IPR023213 -
Spst4g03471 437 Gene3D - 211 433 IPR023213 -
Spst4g03471 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03471 Spst-Chr4 75428063 75434287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03471 2 433 Monolignol Biosynthesis Gene Families AT5G48930 35.240 3.42e-94 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03471 K13065 - gmx:100779652 674.47