Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03461 ATGATGAGGATTGCGTCAGGGAAGAGATACTATGGTGAGGACTGTGATGTGAGTGATGTGGAGGAAGCAAAACAATTCAGAGATATCGCAGAAGAGTTGTTGATGTTAGGAGGTGCGAATAACCCTGGAGAGTTCTTGACTTTGTTCAGGTTGATTGATTTTGATGGCTTGGAGAAGAGGTTGAAAAGACTTGGTCAAAGAATTGATGCATTCTTACAAGGACTCATTGACGAACATCGAAAACACGAGGGTAGAATTCCTAAAGTGGATGAATATCCTATTGTCGAACACTCTTTTTGGACTATGCTACTTGCAGGAACAAATACATTAGTTGTAACTTTAGAATGGTCAATGTCTAATCTATTAAATCATCCTGAAATATTAAAGAAGACAAAAGTTGAAATAGACACTCATATAGAACAAAATCGTCTGGTAGAGGAAGCTGACATTTCAAATCTCCCTTATCTTCAAAGCATTGTTTACAAGACACTTCGATTGCATCCTGCTGCTCCATTATTGGTGCCCCATTTGTCTTCGGAAGATTTCATCGTAAGACAATATAATGTCCCACAAAACACAATTTTGTTAATGAATGCCTGGGCTATTCATAGAGACCCAAAGTTGTGGAGTGACCCCACACAATTTAAGCCTGAGAGATTTAAGAAAGGAAGTGAAGTAAACAAGTTACTTTCATTTGGGTTAGGGAGGAGGGCTTGCCCTGGAGCAAACTTGGCTCAACGTACAGTGAGCTTAACTCTGGCCTTATTAATTCAATGTTTCGAGTGGAAACAAACTAGTAAAGAAGAAATTGATATGACCGAAGGAAAATGGGTCGTTGTAGGTAGAAAACTTCCTTTAGAAGCTATGTGCCAAGTGTGGCAATCACCAACAATTAAGAATTCTAGTCTTATTTAA 915 0.3869 MMRIASGKRYYGEDCDVSDVEEAKQFRDIAEELLMLGGANNPGEFLTLFRLIDFDGLEKRLKRLGQRIDAFLQGLIDEHRKHEGRIPKVDEYPIVEHSFWTMLLAGTNTLVVTLEWSMSNLLNHPEILKKTKVEIDTHIEQNRLVEEADISNLPYLQSIVYKTLRLHPAAPLLVPHLSSEDFIVRQYNVPQNTILLMNAWAIHRDPKLWSDPTQFKPERFKKGSEVNKLLSFGLGRRACPGANLAQRTVSLTLALLIQCFEWKQTSKEEIDMTEGKWVVVGRKLPLEAMCQVWQSPTIKNSSLI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03461 304 Pfam Cytochrome P450 68 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS E-class P450 group I signature 198 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS E-class P450 group I signature 157 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS E-class P450 group I signature 239 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS E-class P450 group I signature 229 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS E-class P450 group I signature 114 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 232 241 IPR017972 GO:0005506|GO:0016705
Spst4g03461 304 PRINTS P450 superfamily signature 105 122 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS P450 superfamily signature 239 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS P450 superfamily signature 158 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PRINTS P450 superfamily signature 230 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 SUPERFAMILY Cytochrome P450 10 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 Gene3D Cytochrome P450 1 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03461 304 PANTHER CYTOCHROME P450 82C3-RELATED 1 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03461 Spst-Chr4 75260587 75262576 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03461 1 291 Cytochrome P450 AT5G36220 49.180 1.35e-103 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03461 K13260 - gmx:100811727 436.802