Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03460 ATGGAACCCTCCTCCTCACTTCAGGTGGAGACAGCAGAGCAACGACAACCTAGTCCTCTCCGAAAAATGTTTGCTGTCGCATCCATAGCAGCAGGAGTCCAATTCGGATGGGCCCTACAACTCTCCCTCCTCACACCTTACGTTCAGACGCTGGGTGTTCCCCACGCTTGGTCTTCCTTCATTTGGCTCTGTGGCCCCATCTCTGGACTCGTTGTTCAACCCATCGTAGGATACAGCAGCGACAGATGCACCTCCCGCTTCGGTCGCCGCCGTCCATTCATCATGGCTGGGGCGCTTGCCGTCGCCATCGCCGTGTTCCTCATCGGCTATGCGGCTGATATAGGACACGCAACCGGGGATGATATAACCAAAAAGACCCGTCCACGAGCTGTAGGCATCTTCGTGATTGGGTTCTGGATCCTGGATGTTGCTAACAACATGCTCCAGGGTCCGTGCCGTGCTTTCCTGGGGGATCTCGCCGCTGGAGACCAGAAAAAGACGAGAACCGCCAACGCTTTTTTTTCGTTCTTCATGGCCATCGGAAACGTCCTCGGCTACGCCGCGGGCTCCTACAACAATCTCCACCGCATCTTCAGTTTCACAGAAACCAAGGCGTGTGATGTGTTTTGTGCCAATCTAAAAAGCTGTTTTTTCTTCTCAATAGTGCTCCTTCTTGTTCTTTGCGCCATTGTTCTCACTTCCGTCGACGATCCACAGTTCACACCTAACCACAACGAATGCGGCGACATTCAAACTGGGGCGCTGTATTCGTGTTTTGGTGAAATGAGTGCTGCGTTTAAGGGATTACAAAGGCCAATGTGGATGCTGATGCTTGTGACTGCCATTAACTGGGTGGGGTGGTTCCCTTATTTTCTGTTCGATACTGATTGGATGGGTCGTGAAGTGTACGGTGGTACGGTGGGACACCCAGAATACGATGCTGGCGTGCATGCAGGTTCGTTGGGTCTCATGCTGAATTCCGTGGTTTTGGCGTTGATGTCTTTGGCGGTGGAACCGTTGGGTCGTGTTGTTGGAGGAATTAAATGGTTATGGGGAATAGTTAACGTTATCCTCGCCGTTTGCATGGCCATGACGGTGGTTATCACAAAGGCTGCGCACCATGAACGGAGTCACAACGGCGTCCTCATTGGTCATCCTTCACTTGGTGTCAAAGTTGGGGCGCTGAGTTTCTTCTCCGTCCTCGGAATCCCTCTCGCGATTACTTTCAGTGTTCCATTTGCTCTGGCTTCTATATACTCCAGTACCTCAGGTGCAGGCCAAGGTCTATCTTTGGGTGTCCTCAATGTTGCCATTGTCGTGCCCCAGATGATAATATCGGCAATAAGTGGACCATGGGATTCTTGGTTTGGTGGTGGCAACTTGCCTGCGTTCGTGTTGGGTGGGGTGGCGGCCGCCGTGAGTGCGGTGTTAGCGGTTGTTTTGCTGCCAAGTCCAAAGCCAGCAGATGTGGCCAAAGCTTCTTCCGTCACCGTAGGGGGTTTCCATTAG 1509 0.5262 MEPSSSLQVETAEQRQPSPLRKMFAVASIAAGVQFGWALQLSLLTPYVQTLGVPHAWSSFIWLCGPISGLVVQPIVGYSSDRCTSRFGRRRPFIMAGALAVAIAVFLIGYAADIGHATGDDITKKTRPRAVGIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANAFFSFFMAIGNVLGYAAGSYNNLHRIFSFTETKACDVFCANLKSCFFFSIVLLLVLCAIVLTSVDDPQFTPNHNECGDIQTGALYSCFGEMSAAFKGLQRPMWMLMLVTAINWVGWFPYFLFDTDWMGREVYGGTVGHPEYDAGVHAGSLGLMLNSVVLALMSLAVEPLGRVVGGIKWLWGIVNVILAVCMAMTVVITKAAHHERSHNGVLIGHPSLGVKVGALSFFSVLGIPLAITFSVPFALASIYSSTSGAGQGLSLGVLNVAIVVPQMIISAISGPWDSWFGGGNLPAFVLGGVAAAVSAVLAVVLLPSPKPADVAKASSVTVGGFH 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03460 502 SUPERFAMILY MFS general substrate transporter 21 487 IPR036259 -
Spst4g03460 502 FunFam Sucrose transport protein 17 482 - -
Spst4g03460 502 CDD MFS_SLC45_SUC 23 468 - -
Spst4g03460 502 Gene3D MFS general substrate transporter like domains 15 482 IPR036259 -
Spst4g03460 502 Pfam MFS/sugar transport protein 23 286 - -
Spst4g03460 502 PANTHER SUGAR TRANSPORTER 19 481 - -
Spst4g03460 502 NCBIfam sucrose/proton symporter 19 486 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03460 Spst-Chr4 75244626 75247295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03460 4 502 Sucrose Transporter Gene Family AT1G22710 63.905 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03460 K15378 - gmx:100785359 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03460 4 75244626 75247295 Spst4g03460 4 75244626 75247295 ECH