LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g03459	ATGGAGGAACAACAGAAACGGGAACCTAGTCCTCTCCGAAAAATGGTGGCGGTGTCATCCATAGCCGCCGGTATCCAATTTGGATGGGCCCTCCAACTCTCCCTTCTAACACCGTATGTTCAAACCCTAGGAGTCCCCCACGCCTGGGCCTCCTTTATCTGGCTCTGCGGGCCCATCTCTGGGCTTGTAGTCCAGCCCATTGTAGGCTACAGCAGTGATCGATGCAAATCTGCCTTTGGCCGCCGCCGCCCATTTATCCTCGCCGGCACGCTTTTTGTTGCCATCTCTGTTATCCTGATCGGCTACGCGGCTGATATAGGACAGCTGGCTGGTGACGACATCACGCAGAAAACCCGTCCACGTGCTGTCGCCATCTTTGTTGTTGGCTTCTGGATCCTGGATGTTGCTAACAACATGCTCCAGGGTCCATGCCGTGCCTTTCTCGGTGACCTGGCTGCTGGCGACCAGCGAAAAACGAGAACTGCCAACTCCTTCTACTCGTTTTTCATGGCCGTGGGCAACGTCCTGGGCTACGCCGCAGGATCCTACGACGGTCTCCATAAGATCTTCCCTTTCACGAAAACTGACGCTTGCAACGTCTTCTGTGCAAACCTGAAGAGTTGCTTCTTCTTCGCCATCGTTCTTCTTCTTGTTTTGTGCATTATCGTTCTCTCTTGCGTGAACGATCCTCAGTTTACGCCATCAGATGAGGACAGGGGAGAGGAGGCAGGGAAGACACACTTTTCGTGCTTCTGCGGAGAAGTGTGTGTTGCGTTCAAGGGATTGAAGAGGCCGATGTGGCTGTTGATGCTTGTGACTGCTGTTAACTGGATCGCATGGTTCCCCTATGTGTTGTTCGACACTGATTGGATGGGTCGTGAGGTGTATGGTGGTGATGTGGGAGAGGCAGCATATGATGCTGGTGTGCATCAAGGTGCTTTGGGACTGATGTTGAATTCAGTGGTGTTGGCTGTGGCGTCGTTGGGTGTGGAACCATTGGGTCGCATGGTTGGTGGAGTGAAGTGGCTATGGTCAATAGTTAATTTTATTCTAGCAATTTGCATGGCAATGACCGTGCTCATCACAAAAGTCGCTGAGAAGGAACGACAAATTAACCCGGCTCGCATTGGACATCCCTCCGTTAATGTGCAAGCTGGAGCCTTAGCATTCTTCTCAGTCCTTGGTATTCCCCTTGCGGTTACCTATAGTGTTCCTTTTGCTTTGGCATCTATCTACTCAAGCACCTCAGGGGCAGGACAAGGTTTATCTTTGGGTCTTCTCAATGTTGCAATTGTCATTCCTCAGATGGTTGTATCGGCAATTAGTGGACCGTGGGACGCTTGGTTTGGTGGCGGCAACTTACCGGCGTTCGTGTTGGGCGCGGGGGCTGCTGCCGTCTGTGCCATACTGGCAATTGTTTTGCTTCCAACCCCAAAGAAAGCTGATGAAGCCAAACTGTCCTCCATGAATATGGGGAGTTTCCATTAA	1488	0.5181	MEEQQKREPSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYSSDRCKSAFGRRRPFILAGTLFVAISVILIGYAADIGQLAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQRKTRTANSFYSFFMAVGNVLGYAAGSYDGLHKIFPFTKTDACNVFCANLKSCFFFAIVLLLVLCIIVLSCVNDPQFTPSDEDRGEEAGKTHFSCFCGEVCVAFKGLKRPMWLLMLVTAVNWIAWFPYVLFDTDWMGREVYGGDVGEAAYDAGVHQGALGLMLNSVVLAVASLGVEPLGRMVGGVKWLWSIVNFILAICMAMTVLITKVAEKERQINPARIGHPSVNVQAGALAFFSVLGIPLAVTYSVPFALASIYSSTSGAGQGLSLGLLNVAIVIPQMVVSAISGPWDAWFGGGNLPAFVLGAGAAAVCAILAIVLLPTPKKADEAKLSSMNMGSFH	495

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g03459	495	NCBIfam	sucrose/proton symporter	11	480	IPR005989	GO:0005886\|GO:0008515\|GO:0015770
	Spst4g03459	495	CDD	MFS_SLC45_SUC	15	472	-	-
	Spst4g03459	495	Gene3D	MFS general substrate transporter like domains	8	475	IPR036259	-
	Spst4g03459	495	PANTHER	SUGAR TRANSPORTER	11	474	-	-
	Spst4g03459	495	Pfam	MFS/sugar transport protein	27	224	-	-
	Spst4g03459	495	FunFam	Sucrose transport protein	9	475	-	-
	Spst4g03459	495	SUPERFAMILY	MFS general substrate transporter	2	481	IPR036259	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst4g03459	Spst-Chr4	75220494	75222305	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst4g03459	1	495	Sucrose Transporter Gene Family	AT1G71890	61.310	0.0	620

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g03459	K15378		-	gmx:100785899	800.431

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