Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03459 ATGGAGGAACAACAGAAACGGGAACCTAGTCCTCTCCGAAAAATGGTGGCGGTGTCATCCATAGCCGCCGGTATCCAATTTGGATGGGCCCTCCAACTCTCCCTTCTAACACCGTATGTTCAAACCCTAGGAGTCCCCCACGCCTGGGCCTCCTTTATCTGGCTCTGCGGGCCCATCTCTGGGCTTGTAGTCCAGCCCATTGTAGGCTACAGCAGTGATCGATGCAAATCTGCCTTTGGCCGCCGCCGCCCATTTATCCTCGCCGGCACGCTTTTTGTTGCCATCTCTGTTATCCTGATCGGCTACGCGGCTGATATAGGACAGCTGGCTGGTGACGACATCACGCAGAAAACCCGTCCACGTGCTGTCGCCATCTTTGTTGTTGGCTTCTGGATCCTGGATGTTGCTAACAACATGCTCCAGGGTCCATGCCGTGCCTTTCTCGGTGACCTGGCTGCTGGCGACCAGCGAAAAACGAGAACTGCCAACTCCTTCTACTCGTTTTTCATGGCCGTGGGCAACGTCCTGGGCTACGCCGCAGGATCCTACGACGGTCTCCATAAGATCTTCCCTTTCACGAAAACTGACGCTTGCAACGTCTTCTGTGCAAACCTGAAGAGTTGCTTCTTCTTCGCCATCGTTCTTCTTCTTGTTTTGTGCATTATCGTTCTCTCTTGCGTGAACGATCCTCAGTTTACGCCATCAGATGAGGACAGGGGAGAGGAGGCAGGGAAGACACACTTTTCGTGCTTCTGCGGAGAAGTGTGTGTTGCGTTCAAGGGATTGAAGAGGCCGATGTGGCTGTTGATGCTTGTGACTGCTGTTAACTGGATCGCATGGTTCCCCTATGTGTTGTTCGACACTGATTGGATGGGTCGTGAGGTGTATGGTGGTGATGTGGGAGAGGCAGCATATGATGCTGGTGTGCATCAAGGTGCTTTGGGACTGATGTTGAATTCAGTGGTGTTGGCTGTGGCGTCGTTGGGTGTGGAACCATTGGGTCGCATGGTTGGTGGAGTGAAGTGGCTATGGTCAATAGTTAATTTTATTCTAGCAATTTGCATGGCAATGACCGTGCTCATCACAAAAGTCGCTGAGAAGGAACGACAAATTAACCCGGCTCGCATTGGACATCCCTCCGTTAATGTGCAAGCTGGAGCCTTAGCATTCTTCTCAGTCCTTGGTATTCCCCTTGCGGTTACCTATAGTGTTCCTTTTGCTTTGGCATCTATCTACTCAAGCACCTCAGGGGCAGGACAAGGTTTATCTTTGGGTCTTCTCAATGTTGCAATTGTCATTCCTCAGATGGTTGTATCGGCAATTAGTGGACCGTGGGACGCTTGGTTTGGTGGCGGCAACTTACCGGCGTTCGTGTTGGGCGCGGGGGCTGCTGCCGTCTGTGCCATACTGGCAATTGTTTTGCTTCCAACCCCAAAGAAAGCTGATGAAGCCAAACTGTCCTCCATGAATATGGGGAGTTTCCATTAA 1488 0.5181 MEEQQKREPSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYSSDRCKSAFGRRRPFILAGTLFVAISVILIGYAADIGQLAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQRKTRTANSFYSFFMAVGNVLGYAAGSYDGLHKIFPFTKTDACNVFCANLKSCFFFAIVLLLVLCIIVLSCVNDPQFTPSDEDRGEEAGKTHFSCFCGEVCVAFKGLKRPMWLLMLVTAVNWIAWFPYVLFDTDWMGREVYGGDVGEAAYDAGVHQGALGLMLNSVVLAVASLGVEPLGRMVGGVKWLWSIVNFILAICMAMTVLITKVAEKERQINPARIGHPSVNVQAGALAFFSVLGIPLAVTYSVPFALASIYSSTSGAGQGLSLGLLNVAIVIPQMVVSAISGPWDAWFGGGNLPAFVLGAGAAAVCAILAIVLLPTPKKADEAKLSSMNMGSFH 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03459 495 NCBIfam sucrose/proton symporter 11 480 IPR005989 GO:0005886|GO:0008515|GO:0015770
Spst4g03459 495 CDD MFS_SLC45_SUC 15 472 - -
Spst4g03459 495 Gene3D MFS general substrate transporter like domains 8 475 IPR036259 -
Spst4g03459 495 PANTHER SUGAR TRANSPORTER 11 474 - -
Spst4g03459 495 Pfam MFS/sugar transport protein 27 224 - -
Spst4g03459 495 FunFam Sucrose transport protein 9 475 - -
Spst4g03459 495 SUPERFAMILY MFS general substrate transporter 2 481 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03459 Spst-Chr4 75220494 75222305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03459 1 495 Sucrose Transporter Gene Family AT1G71890 61.310 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03459 K15378 - gmx:100785899 800.431