Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03458 ATGGAGGTACCATCTCCCACCAAACCCAACGACCCAACAAAGCCTTCCATCACCACTATGAGTGTGGAGGCCGGCCAGGCCGAGGCGAGCCCACTCCGGAAAATGTTTGCTGTCGCGTCCATAGCTGCCGGCATACAATTCGGGTGGGCTCTTCAGCTCTCTCTGCTCACCCCCTACGTCCAGCTCTTAGGAGTCCCGCACGCAGCAGCCTCCTTCATCTGGCTCTGTGGCCCCATCTCCGGACTCGTCGTGCAGCCCATTGTGGGTTACTACAGCGACCGAAGCACTTCCCGCTTCGGTCGAAGACGCCCCTTTATCCTCGGAGGTGCAGTGGCCGTCGCCATAGCTGTGTTCCTTATCGGCTACGCAGCCGATATAGGATACTCAGCTGGGGATGACATAACAAAGAAAACTCGTCCCCGTGCCGTTGCAGTGTTTGTCATAGGATTCTGGATCCTAGACGTGGCTAACAACATGTTACAGGGACCTTGTCGTGCGTTCCTAGCAGACTTAGCTGCCGGTGACCAGCGAAAAACGAGAATAGCCAATGGGTTTTTCTCGTTCTTCATGGCCGTTGGCAACGTGCTGGGATATGCAGCAGGGTCTTTCAGTGCTCTGCACAAGATCTTTCCCTTCACGCAGACCAAGGCGTGCGATGTTTTCTGCGCCAACTTGAAAAGTTGTTTCTTTTTCTCCATCTTGCTGCTGCTGTTTTTGGCCACGGTGGCTCTCATTTACGTGAAGGACAAGCCCGTGATCGCACAAGCGGTGCAAGAGGATGCGCAGCCCTCGTGTTTCTTTCAGCTGTTCGGCGCGTTGAAGGAACTCAAGAAACCGATGTGGATGCTCATGTTGGTGACTGCTATCAACTGGATCGGGTGGTTTCCCTACTTCCTGTTCGACACCGACTGGATGGGGCGTGAGGTGTACGGCGGAACGGCCGGCGAGGACGCGTACGCGGCGGGGGTGCGCGTGGGGTCTCTGGGGCTGCTGTTAAACTCCGTCGTTTTGGGGTTCATGTCGCTGGCGGTTGAACCGTTGGGGCGCATGGTTGGTGGAGTGAAGAGGCTGTGGGCGATCGTGAACTTCATTCTCGCGATTGGGTTCGGAATGACCGTGGTGATAACCAAGGTGGCGGAGCACCAGCGCCACTTGAACCCCGCCGCCGTGGGCCACCCCTCCGATGGCGTTAAAATTGGGTCCATGATTTTCTTCGCAGTTCTCGGAGTCCCCCTTGCGATTACTTTCAGTGTTCCTTTTGCTCTAGCATCAATATACTCCACTTCTGCAGGAGCAGGCCAAGGTTTATCCTTGGGAGTCCTCAATCTTGCAATTGTGGTACCACAGATGGTGGTGTCTGCATTGAGTGGTCCTTGGGATGCTCTGTTTGGTGGTGGCAACTTGCCGGCTTTCATGGTGGGTGCGGCGGCGGCGGCCTTGAGTGCTATAATGGCGATTGTCTTGCTGCCAACCCCAAAACCAGCTGATGAGGCCAAGGCTGCAACCATGGTAGCAGGGGGCTTTCATTAG 1530 0.5588 MEVPSPTKPNDPTKPSITTMSVEAGQAEASPLRKMFAVASIAAGIQFGWALQLSLLTPYVQLLGVPHAAASFIWLCGPISGLVVQPIVGYYSDRSTSRFGRRRPFILGGAVAVAIAVFLIGYAADIGYSAGDDITKKTRPRAVAVFVIGFWILDVANNMLQGPCRAFLADLAAGDQRKTRIANGFFSFFMAVGNVLGYAAGSFSALHKIFPFTQTKACDVFCANLKSCFFFSILLLLFLATVALIYVKDKPVIAQAVQEDAQPSCFFQLFGALKELKKPMWMLMLVTAINWIGWFPYFLFDTDWMGREVYGGTAGEDAYAAGVRVGSLGLLLNSVVLGFMSLAVEPLGRMVGGVKRLWAIVNFILAIGFGMTVVITKVAEHQRHLNPAAVGHPSDGVKIGSMIFFAVLGVPLAITFSVPFALASIYSTSAGAGQGLSLGVLNLAIVVPQMVVSALSGPWDALFGGGNLPAFMVGAAAAALSAIMAIVLLPTPKPADEAKAATMVAGGFH 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03458 509 FunFam Sucrose transport protein 29 489 - -
Spst4g03458 509 Pfam MFS/sugar transport protein 35 294 - -
Spst4g03458 509 PANTHER SUGAR TRANSPORTER 31 488 - -
Spst4g03458 509 SUPERFAMILY MFS general substrate transporter 34 494 IPR036259 -
Spst4g03458 509 NCBIfam sucrose/proton symporter 31 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Spst4g03458 509 Gene3D MFS general substrate transporter like domains 29 495 IPR036259 -
Spst4g03458 509 CDD MFS_SLC45_SUC 35 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03458 Spst-Chr4 75203004 75205780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03458 16 509 Sucrose Transporter Gene Family AT1G22710 63.817 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03458 K15378 - gmx:100786411 883.248