Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03454 ATGTGCCTCAAAATCCAATTTTTGTTCCTCACCCTCTTTTTAGCAGCCACCGTTGGCACCGCCATAGACCCAGGTTCCACTCTCTCAGCCTCTTCCAACCAAACCTGGTCTTCTAGCAGTGGCACCTTCTCCCTCGGCTTCATCTCCGTTCAGCCTCCGACCACCCCTCCTTCCTTCATCGCCGCCATCTCCTACACCGGCGGAAATCCTGTCGTCTGGACCGTTGACAAAGGCACCGCCGTTGACTCCGGCGGTTCCCTTCAGTTCCTTACCTCCGGGTCCCTCCGCCTCGTCAACGGCTCCGGTACCTCCGTGTGGGACTCCGGCACGGCGGGAGCCACGTCAGCAGCCCTTGAGGACAGCGGTAATTTGGTAATTTCCAATAGCACTGGAACCCTCTGGTCAAGCTTTGACAACCCCACTGATACCCTTGTGCCCTCTCAGAATTTCAGTGTTGGTAAGGTTCTGACTTCTGAAAGTTACTCTTTTAGCCTTAGCCAAATTGGGAATTTATCTCTTCAGTGGAACAATAGCATAGTGTTCTGGAACCAGGGTTTGAATTCCTCTGTGAATGTGAGTTTGCAGTCCCCTGTGTTGACTTTGACAACAATTGGGCTTTTGGAACTTTCTGATGTGAAATTGAGTAGTCCTGTTCTTGTTGCCTATAGTAGTGACTATGATTTGAATGCTGGGGTGTTCAGGGTGTTGAAGTTGGATAATGATGGGAATTTGAGGATTTATAGTACTAGTCTGGGTGGTGGAAGTTCTAGTGTTAAATGGGCTGCTGTTGCTGATCAATGTCGGGTTTATGCTTACTGTGGGAACTATGGTGTGTGTGGCTACAATGATTCCAGCCCAGTATGTGGTTGCCCTTCAGAGAATTTTGAGATGGTTGATCCGAATAATGGTAGGAAAGGGTGCAGGAGGAAGGCGAGTCTTGATAGTTGTCAAGGGAGCACTGGTATGTTGACCTTGGATCATACTGTGGTGTTGAGTTATCCCCCTGACGCTGGAACGGAGACGTTTAACATTGGATTATCGGCGTGTAGAGCAAATTGTCTTTCGGGTTCCAGTGCCTGTTTTGCTTCTACTTCCTTGTCAGATGGCACAGGGCTGTGTGTAATAAGATCAAAAGATTTTGTTAGTGGATATCATGATCCTTCACTGCCTAGCACTTCTTATTTCAAGGTTTGTCTGCCATTGGCGCCAAATCCACCACCCTCTTTGGCGGATACTGTGGGTGACAGGAGGTCCAAGGTGCCTGCCTGGGTTGTGGTGGTGGTTGTGTTGGGTACCCTTTTGGGTTTGATTGCCTTGGAAGGGGGCTTGTGGATTTGTTGTAGGAATAATAAGAAGTTTGGTGGGTTGTCAGCTCAGTATGCTCTTCTTGAGTATGCTTCTGGTGCTCCGGTGCAGTTCTCGTACAAGGAGCTCCAGCAAGCGACAAAGGGTTTCAAGGAGAGGCTGGGAGCTGGTGGATTTGGTGCTGTTTATAGAGGCACTCTTGTGAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATCGAGCAAGGTGAGAAGCAGTTTAGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTGAATTTGGTGAGGCTTATTGGCTTTTGCTCCGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGATCTCTTGATAATTTTCTATTCTTGACAGAACAGCATTCAGGAAAATTGTTGAATTGGGAGTACCGCTTCAACATTGCACTGGGCACAGCAAGAGGCATCACATACCTACATGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAACCTGAAAACATTCTCTTGGATGAGAATTATGTTTCCAAAGTCTCTGATTTTGGTCTTGCAAAGCTTATTAATCCCAAGGACCACAGGCACCGGACCTTAACAAGTGTGAGAGGAACAAGAGGATATTTAGCTCCGGAATGGCTTGCAAATCTTCCAATAACATCCAAATCTGATGTTTATAGCTATGGTATGGTTTTGTTGGAGATTGTGAGTGGAAGGAGGAATTTTGATGTTTCAGAGGAAACAAATAGGAAGAAGTTCTCCATTTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAGTGAAATTTTGGACAAAAGACTATCTGACCAAGAAGTTGATATGCAGCAAGTAAAAAGGGCAATTCAAGCAAGCTTTTGGTGCATCCAAGAGCACCCATCTCAGAGACCAACAATGAGCAGAGTGCTGCAAATGCTAGAAGGGGTAACTGAGGTTGAAAAGCCACCTACCCCAAAATCAGTAATGGAAGGTACTGTTAGTGGAACCAGCACATACCTGAGTAGCAATGCCAGTGCATTCTCCACTGTCGGAGTTTCACCCCCAGGTCCCTCCTCTACATCATCATTTCAGATTAGTGGTGCTTCAACCTTCACCTCAGGAAGGACCACTGATAAGGCAACCTCATCCCTTTTACAACCAGACAATTGA 2502 0.4684 MCLKIQFLFLTLFLAATVGTAIDPGSTLSASSNQTWSSSSGTFSLGFISVQPPTTPPSFIAAISYTGGNPVVWTVDKGTAVDSGGSLQFLTSGSLRLVNGSGTSVWDSGTAGATSAALEDSGNLVISNSTGTLWSSFDNPTDTLVPSQNFSVGKVLTSESYSFSLSQIGNLSLQWNNSIVFWNQGLNSSVNVSLQSPVLTLTTIGLLELSDVKLSSPVLVAYSSDYDLNAGVFRVLKLDNDGNLRIYSTSLGGGSSSVKWAAVADQCRVYAYCGNYGVCGYNDSSPVCGCPSENFEMVDPNNGRKGCRRKASLDSCQGSTGMLTLDHTVVLSYPPDAGTETFNIGLSACRANCLSGSSACFASTSLSDGTGLCVIRSKDFVSGYHDPSLPSTSYFKVCLPLAPNPPPSLADTVGDRRSKVPAWVVVVVVLGTLLGLIALEGGLWICCRNNKKFGGLSAQYALLEYASGAPVQFSYKELQQATKGFKERLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFLTEQHSGKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVSKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLEIVSGRRNFDVSEETNRKKFSIWAYEEFEKGNISEILDKRLSDQEVDMQQVKRAIQASFWCIQEHPSQRPTMSRVLQMLEGVTEVEKPPTPKSVMEGTVSGTSTYLSSNASAFSTVGVSPPGPSSTSSFQISGASTFTSGRTTDKATSSLLQPDN 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03454 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 558 767 - -
Spst4g03454 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 140 262 - -
Spst4g03454 833 Gene3D - 14 139 IPR036426 -
Spst4g03454 833 Gene3D Transferase(Phosphotransferase) domain 1 558 774 - -
Spst4g03454 833 MobiDBLite consensus disorder prediction 791 833 - -
Spst4g03454 833 CDD STKc_IRAK 489 759 - -
Spst4g03454 833 Pfam D-mannose binding lectin 71 155 IPR001480 -
Spst4g03454 833 PANTHER OS07G0415500 PROTEIN 7 769 - -
Spst4g03454 833 Pfam PAN-like domain 316 382 IPR003609 -
Spst4g03454 833 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Spst4g03454 833 ProSiteProfiles Bulb-type lectin domain profile. 27 139 IPR001480 -
Spst4g03454 833 SMART blect_4 27 140 IPR001480 -
Spst4g03454 833 ProSiteProfiles Bulb-type lectin domain profile. 141 259 IPR001480 -
Spst4g03454 833 ProSiteProfiles Protein kinase domain profile. 483 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03454 833 PIRSF SRK 1 812 IPR024171 GO:0004674
Spst4g03454 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 186 IPR036426 -
Spst4g03454 833 SMART serkin_6 483 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03454 833 FunFam S-receptor-like serine/threonine-protein kinase 456 557 - -
Spst4g03454 833 Pfam Protein kinase domain 486 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03454 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Spst4g03454 833 Gene3D Phosphorylase Kinase; domain 1 455 557 - -
Spst4g03454 833 SUPERFAMILY Protein kinase-like (PK-like) 466 758 IPR011009 -
Spst4g03454 833 Gene3D - 140 261 IPR036426 -
Spst4g03454 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 139 - -
Spst4g03454 833 Pfam S-locus glycoprotein domain 229 291 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03454 Spst-Chr4 75042915 75045416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03454 456 767 Receptor kinase-like Gene Family AT5G20050 44.615 2.24e-81 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst4g03454 Pkinase 3.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03454 - - gmx:100795819 1323.15