Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03446 ATGGAATTCTCCACAGCATATGGGAGAGGTGATGAAATTAGTTGGGGAAGCATGAAAGGGTTTTCCCTCCAAGTCCTTACAGGGAGGTGGTTCATGATGTTTTCTTCATTTATGATCATGTCAATGTCAGGAGCAAGCTACATTTTTAGCCTATACTCCCAGGAAATCAAGTTAGTTCTTGGTTATGACCAATCCACTCTCAATCTATTAAGCTTCTTCAAGGACTTGGGAGACACCACAGGCATTCATGCAGGCCTAATCTATGAGGTCACACCTCCTTGGTTTATCTTGACAATTGGTGGGGTTCTCAACTTTTCTGGGTACTTTGTGATTTGGCTTGTTGTCACCAGCAAAATTGCAAAGCCCCAAGTGTGGCAGATGGGCTTGTACCTCTTCATTGGAGCCAATTCTCATTGTGCAACCAACACTGGAATTCTTGTGACCAGTGTAAAGAACTTCCCTGGTAGCAGAGGCATTGTCTTAGGCCTTTTGAATGGGTATATAGGTTTAAGTGCAGTAATAATTACTCAGCTATACTATGCCTTCTATGGAAATGACTCCAAATTCTTCATTTTGCTCATGGCATGGCTACCAACTGCTACAGATTTTTTGTTCCTTCCAGTTATCCGAAACCATCAGAGTATTCAACAGCCAAATGACACCAAAGCTTTCTACAAGTTCCTCTATTTGACATTTGTCCTTGCAGGGTTCCTCATGTATGTAATTGTAGTACAACAAATTTTCACTTTCTCTCAGAGTGAATATTATGTTACTACCACTGTGATTCTTCTTTTGCTCATCCTTCCACTTGCTGTTGTTATTGTGGAAGAACACAAGATTTGGAAGAGTAAGCAAGAAAACATCAATAGGGAAGGTAGTCAAAAGCTGTTGGCAAAATCTCAAAATACAGCTACAGAAAATCCTTCTCAAGAAAAGTCTTCCCAGGCTCCCCATACAGGACAATTTGTCCAAGAAAAAGTCTCCTGTTGGGAAAACATATTCAGCCCACCAGAAAGAGGTGAAGATCATACAATACTTCAAGCCACTTTTAGCCTTGACATGGTGCTTCTCTTGTTAACTTCTATATGTTCACTTGGTAGCTACCAGACCATGGTAAACAACTTGAGTCAAATTGGAATTTCATTAGGATATCCTGCACATGCCATAACCACAGTTGTCTCTCTTACGTCCATTTGGATCTATTTCGGTAAGGTCGTTCAAGGGGTTATCTCAGAATTTATCATTGACAAACATAGAGTCCCTAGGCCTCTCATGCTCACATCATTGCTTTTATTATCTTGTGTTGGCCATCTTTTAATTGCCTTCAATGTCCCAAATGGTCTCTATGTAGCCTCAATTGTTATTGGGTTCTGCTTAGGGGCTAACTGGCCATTACTCCATTCCATTATATCTGAACTTTTTGGCCTCAAACATTATTCAACATTATACAATGTTGGATCACTAGCAAGTCCAATTGGGTCATACTTGCTCAATGTGGGGGTTGCAGGGTATCTCTATGACAGGGAAGCCAGAAGCCAAATGGAAGCTATGGGACAAAAGACAAGCCCAGGAGAGGAGCTGAACTGCAAAGGGGAGGACTGCTACAAGTTAGCATTCATTTTAATGACTGCAGTTTGCTTGTTTGGGGCACTTCTGTCACTCATTTTAGTCTTTAGGACTGTACAATTCTACAAAAGTGACCTATACAAGAAATTCAAAGAAGCTAAAACTGATGAAACTGAAACGGGTGAGTCTTACAACAGCATTGGATCATCATCAGCTGCAAATGAAGACTAG 1797 0.4085 MEFSTAYGRGDEISWGSMKGFSLQVLTGRWFMMFSSFMIMSMSGASYIFSLYSQEIKLVLGYDQSTLNLLSFFKDLGDTTGIHAGLIYEVTPPWFILTIGGVLNFSGYFVIWLVVTSKIAKPQVWQMGLYLFIGANSHCATNTGILVTSVKNFPGSRGIVLGLLNGYIGLSAVIITQLYYAFYGNDSKFFILLMAWLPTATDFLFLPVIRNHQSIQQPNDTKAFYKFLYLTFVLAGFLMYVIVVQQIFTFSQSEYYVTTTVILLLLILPLAVVIVEEHKIWKSKQENINREGSQKLLAKSQNTATENPSQEKSSQAPHTGQFVQEKVSCWENIFSPPERGEDHTILQATFSLDMVLLLLTSICSLGSYQTMVNNLSQIGISLGYPAHAITTVVSLTSIWIYFGKVVQGVISEFIIDKHRVPRPLMLTSLLLLSCVGHLLIAFNVPNGLYVASIVIGFCLGANWPLLHSIISELFGLKHYSTLYNVGSLASPIGSYLLNVGVAGYLYDREARSQMEAMGQKTSPGEELNCKGEDCYKLAFILMTAVCLFGALLSLILVFRTVQFYKSDLYKKFKEAKTDETETGESYNSIGSSSAANED 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03446 598 Gene3D MFS general substrate transporter like domains 349 565 IPR036259 -
Spst4g03446 598 MobiDBLite consensus disorder prediction 575 598 - -
Spst4g03446 598 SUPERFAMILY MFS general substrate transporter 228 562 IPR036259 -
Spst4g03446 598 SUPERFAMILY MFS general substrate transporter 14 208 IPR036259 -
Spst4g03446 598 CDD MFS_Mch1p_like 28 550 - -
Spst4g03446 598 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 567 - -
Spst4g03446 598 MobiDBLite consensus disorder prediction 582 598 - -
Spst4g03446 598 MobiDBLite consensus disorder prediction 297 319 - -
Spst4g03446 598 Pfam Major Facilitator Superfamily 357 560 IPR011701 GO:0022857|GO:0055085
Spst4g03446 598 Pfam Nodulin-like 29 274 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03446 Spst-Chr4 74936260 74938056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03446 16 598 Nodulin-like Gene Family AT2G39210 56.706 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03446 - - gmx:102661181 901.738