Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03414 ATGGAGTCACTCCAAACTGCTCTCTCTCCTCTGACAATTGCATTTCTAGTCCTCATTCCGACCTTCCTCTTCCTCGTCCTCCACCGCTCCAGAAGCAAACAACGCAAAGAACCACCCACCATCCCCGGCGCGTGGCCGATCCTCGGACACCTCCCCCTCCTGGCGCGCTCCCCAGCCACCCACCACCTCCTGGGCTCCGTGGCTGACAGCCACGGCCCCCTCTTCACCATCAAGCTTGGGACAGTCAAAACCTTAGTCATCAGCAACTGGGAAACCGCCAAAGAGTGCTTCACCACAAACGATGTCGCTGTGTCCTACCGCCCCAACCTCGTGGCCTGCGAAAACATGACCTACAACTTCGCCATGGTAGGGCTCGCTCCCTACGGCCAATTTTGGCGCGACATGCGCAAGAAAGTTGCCTCCGTGTTCCTCGCGGACTATCGCCTCGACGCGTTCTCGGACGTGCGCGTTTCCGAGGTGAGAACCTCTGCCAAAGAGCTGTACCACAAGTGGACCCGTGGGAAAACGGAGAACGGGTTTTTCGAGGTGGAAATGAAACAGTGGTTGAAGGAGGTTGCATTCAACGTGGTGCTGAGGATGATCGCTGGGAAGAGGTACTTTGGAGAAACCGCGGTGGTTGAGGAGGAAGAAGCGCGGAGGTGTTTGGTGGCGTTAAATGACTACATGCGGCTGTTCGGGGTGTTCGCGGTGGCGGACGCGGTGCCGTGGCTCAGGTGGTTCGATTTCGGAGGGCATGAGAAGGCCATGAAAGAAAATTTCAAGGAGTTGGATGTTGTGGTGGAAGGATGGTTGGAAGAACACAAGAGGAAAAGGGGTTTGAATGGTGAGAAAGGTGGGGATTTCATGGATGTGATGCTGTCGATGATCGATGGAACCAACATTCATGGGTTTGATTCTGATACCATCATCAAAGCCACGTCAATGGCATTGATTTTGGGAGGAACAGACACAAGCTCTGCTACTAACATATGGACACTGTCTTTGCTGCTGAACAATCCTCTGGCATTGGCAAAAGTAAAGGAAGAAATTGACACTCACATTGGGAAAGAGAGACTTGTAACTGAGTCTGACATAACCAAGTTGGTGTACCTTCATGCAGTTGTTAAGGAGTCACTGAGGCTATATCCACCCACTCCTCTTTCTGCCCCTCGTGAATTCAGAGAAGATTGCATGTTTGGAGAGTACCATGTGAAGAAAGGAACTCGTCTAATCACAAACTTGTGGAAGATCCAAACAGACCCTAGTATTTGGCCAGAGCCCTTGGAGTTCAAGCCAGAAAGGTTCCTCACTACACACAAAGATGTGGATGTTAAGGGAAAACACTTTGAGCTCATACCTTTTGGAAGTGGTAGGAGGATATGCCCTGGAATATCCTTTGCCCTTAGAACTTCTCATTTGACTTTGGCAAACTTTCTTCACTGCTTTGATGTCTCAAAAACTTCAAGTGAACCTCTAGACATGACTTCAGTGGTAGAATTGACCAATGTTAAAGTTGCTCCCATTGAAGTTCTCATCAAACCTCGTTTGGCTCATAGTCTTTATGAAAGCATGTGA 1575 0.5016 MESLQTALSPLTIAFLVLIPTFLFLVLHRSRSKQRKEPPTIPGAWPILGHLPLLARSPATHHLLGSVADSHGPLFTIKLGTVKTLVISNWETAKECFTTNDVAVSYRPNLVACENMTYNFAMVGLAPYGQFWRDMRKKVASVFLADYRLDAFSDVRVSEVRTSAKELYHKWTRGKTENGFFEVEMKQWLKEVAFNVVLRMIAGKRYFGETAVVEEEEARRCLVALNDYMRLFGVFAVADAVPWLRWFDFGGHEKAMKENFKELDVVVEGWLEEHKRKRGLNGEKGGDFMDVMLSMIDGTNIHGFDSDTIIKATSMALILGGTDTSSATNIWTLSLLLNNPLALAKVKEEIDTHIGKERLVTESDITKLVYLHAVVKESLRLYPPTPLSAPREFREDCMFGEYHVKKGTRLITNLWKIQTDPSIWPEPLEFKPERFLTTHKDVDVKGKHFELIPFGSGRRICPGISFALRTSHLTLANFLHCFDVSKTSSEPLDMTSVVELTNVKVAPIEVLIKPRLAHSLYESM 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03414 524 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 CDD CYP82 72 515 - -
Spst4g03414 524 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PANTHER CYTOCHROME P450 82C3-RELATED 17 521 - -
Spst4g03414 524 FunFam Cytochrome P450 82C4 28 513 - -
Spst4g03414 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Spst4g03414 524 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g03414 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03414 Spst-Chr4 74497638 74499517 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03414 4 521 Cytochrome P450 AT4G31940 45.731 1.06e-164 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03414 - - gmx:100802193 850.506