Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03401 ATGGCTAAGCCCAGTTCTTTGCCGTCTTCATATTCCTTGTTCTTGATTTCTTCCATGCTATTTACTTCATTCTTGGTTTCCTCTGAGGCAGAAGTGAATGGACTATCATTTTCCTTCTATTCCCAAACATGTCCCAACCTTGAAACCATTGTCATTAACCATCTCAAGAAGGTCTTCAAGCAAGCTCACTGGCAAGCTCCAGCCTTACTGGTCATTTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGGATCTTTGTTACTGGATGGGAATCCAGGAGAAAGGGATGAACCACTGAACAGAGGCATAAACCATAAGGCCCTGCAGACCATTGATGACCTAAGAGAGCTTGTTCAGAGGGACTGTGGAAGGATCGTTTCTTGTGCAGATATCACTGTCTTAGCAGCTCGTGATGCTATTTTTCTTTCTGGAGGACCCTATATTAAAGTGCCACTTGGAAGACGAGATAGTCTGAACTTTAGCATTGAAGAAGCAAACAACCTTCCATTACCCTACAACACCACCAATGTGACCCTCAAAACCTTTGCATCCAAAAACTTGGATGTTACAGATGTGGTGGCCTTAGCAGGTGCACACACTATTGGTCATGCCCATTGCCACACATTCTACAATAGGGTTTCTCCTCCAGACCCCAACATGGACAAAACCCTAGCCAAACTCCTAAATTCCACTTGTCCCACTACGTACTCACGCAACACTTTCCACTTGGATATTAGAACACCCAAAGTGTTCGATAACAAATACTACATTAACTTAATCAACCACCAAGGTTTATTCACTTCAGATCAAGATCTGTACGCAGATAATAGGACAAAGGGGTTGGTGGAGACCTTTGCACTTGACCAAACCTTATTCTTCCAGAAATTCATGGATGCTTTTATAAAGATGAGCCAATTGAATGTGTTGACAGGGAACAACGGTGAAATTCGTGCAAAATGTAATGTGATAAATGATGAGAGATCTATAGTGGCGTCTATGGTGGATGACATTGTACAATTACCTAATTAG 1029 0.4218 MAKPSSLPSSYSLFLISSMLFTSFLVSSEAEVNGLSFSFYSQTCPNLETIVINHLKKVFKQAHWQAPALLVIFFHDCFVQGCDGSLLLDGNPGERDEPLNRGINHKALQTIDDLRELVQRDCGRIVSCADITVLAARDAIFLSGGPYIKVPLGRRDSLNFSIEEANNLPLPYNTTNVTLKTFASKNLDVTDVVALAGAHTIGHAHCHTFYNRVSPPDPNMDKTLAKLLNSTCPTTYSRNTFHLDIRTPKVFDNKYYINLINHQGLFTSDQDLYADNRTKGLVETFALDQTLFFQKFMDAFIKMSQLNVLTGNNGEIRAKCNVINDERSIVASMVDDIVQLPN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03401 342 Gene3D Peroxidase, domain 2 169 303 - -
Spst4g03401 342 FunFam Peroxidase 38 181 - -
Spst4g03401 342 FunFam Peroxidase 169 303 - -
Spst4g03401 342 ProSiteProfiles Plant heme peroxidase family profile. 34 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 Pfam Peroxidase 53 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Spst4g03401 342 Gene3D - 39 324 - -
Spst4g03401 342 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 CDD secretory_peroxidase 34 323 IPR033905 GO:0004601|GO:0042744
Spst4g03401 342 PANTHER - 19 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03401 342 SUPERFAMILY Heme-dependent peroxidases 32 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03401 Spst-Chr4 74312414 74313662 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03401 32 326 Peroxidase AT1G71695 53.488 5.86e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03401 K00430 - gmx:100816373 524.242