Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03399 ATGGCTAGGGTTAGTGCTTTGTTTCACTCTTTTCTCTTGGTTTCTTCCCTACTACTGGCTTCTCAAACCCTAGTCTCCTCTAGGAAACTAGAAAAAAAACCTTCCCTTGTCCCTGGATTATCGTGGAATTACTATTTCATAGAATGTCTAAATCTTGAAGGGATCGTGAAGGGTCATCTGGAGAAAGCTTTCAAGACGGATAAAGGATTAGCTCCTGGCATTCTTCGACTCTTCTTCCATGACTGCTTTTCTAATGGTTGTGACGCGTCCATATTGTTGAATGCAGACGATGGACAAGATGAAAAAAGCCACCCTGCTAACATTGGTATAAGACCAGAAGCTCTTCAAGTCATTGAAGACATTCGAAGTCGCATTTATTTGCAGTGTCTTCCGGTTGTTTCTTGTGCAGACATCCTTGTTCTTGCAGCACGTGAATCTGTTCGCCAATTGGGAGGCCCAAGTTTCGATGTGCCCCTGGGAAGAAAAGACAGCTTCACATTTGACCTAGACGGACCGGACAACCTCCCACCTTCATTCTTCCGAACTGACGAGCTCCTCGATCTCTTCGCCGAGAGAGACTTCGACGCCACAGAACTGGTCGCCCTCTCCGGCGCCCACACCTACGGTAGGTCCCACTGCCTCTCTCTGGCCAACAGAACCACTGAATCGGACCCACCCATCGACCCGGACTTCAAGAACAAGCTCCTGGCCACGTGCCCCACTCTTGATTCCGACAACACCGTGGACCTGGACGTGCGCACCCCGGCCACGTTCGACAACATGTACTACATCAACCTGCTGAATCGGCAGGGTGTGTTCACCTCGGACCAGGACCTCGCGAGCCACCCCCAGACGAAGGAGATCGTGAACACGTACGCCTCCAACCAGAAGGAGTTCTTCAAGGCATTCCAGGACGCGTTTGTGAAGGTGAGCCAGATCGACGTCATCACGAGTCGCCAGGGCAAGGGAGAGATTCGCAAAAAGTGCTTCACCCCCAATAAGAAGAGCATGGTTTCAGTGGAGGGTGCGGTGGAAGAAGTGGTGCAGTTGGCAGAGACCATTTGA 1065 0.5108 MARVSALFHSFLLVSSLLLASQTLVSSRKLEKKPSLVPGLSWNYYFIECLNLEGIVKGHLEKAFKTDKGLAPGILRLFFHDCFSNGCDASILLNADDGQDEKSHPANIGIRPEALQVIEDIRSRIYLQCLPVVSCADILVLAARESVRQLGGPSFDVPLGRKDSFTFDLDGPDNLPPSFFRTDELLDLFAERDFDATELVALSGAHTYGRSHCLSLANRTTESDPPIDPDFKNKLLATCPTLDSDNTVDLDVRTPATFDNMYYINLLNRQGVFTSDQDLASHPQTKEIVNTYASNQKEFFKAFQDAFVKVSQIDVITSRQGKGEIRKKCFTPNKKSMVSVEGAVEEVVQLAETI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03399 354 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 ProSiteProfiles Plant heme peroxidase family profile. 39 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PANTHER - 15 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 Pfam Peroxidase 57 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 CDD secretory_peroxidase 39 329 IPR033905 GO:0004601|GO:0042744
Spst4g03399 354 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Spst4g03399 354 Gene3D - 43 329 - -
Spst4g03399 354 SUPERFAMILY Heme-dependent peroxidases 35 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Spst4g03399 354 Gene3D Peroxidase, domain 2 177 311 - -
Spst4g03399 354 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g03399 354 FunFam Peroxidase 43 178 - -
Spst4g03399 354 FunFam Peroxidase 176 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03399 Spst-Chr4 74267941 74270361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03399 10 350 Peroxidase AT1G71695 44.413 8.19e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03399 K00430 - gmx:100795412 454.521