Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03371 ATGAAGAGTTTTTTGTTGGGGTGTGTGGCCACTGTGGAGAAGAATAGACCATATGTTGCAATGGTGTTTATTCAGTTTGTGTATGCAGGAATGGCCTTGTTGTCCAAGGCTGCAATCTCCAAGGGAATGAGCCCTTATGTGTTTGTTGTTTATAGACAAGCCTTTGCATCACTTGTTCTATCTCCATTTGCTTTCTTCGAAAGTAACCAATCAGCACCTCTGTCATGCAACTTCTTGTGCAAATTATTCCTAGTTTCTCTTGTTGGGTTAACTCTCAGTTCAAACCTGTACTATGTTTCAATCAACTACACCACGGCAACATTTGCAGCAGCCTCCACAAACACAGTCCCTGCCATTACTTTTATCATGGCTCTTTTACTCAGGGCCGAAAGCATTTTCATAAAACGTGAACATGGACTAGCCAAGATTCTGGGCTCTATTTTAAGCCTTTCTGGGGCAATTACATTTGCTTTAGTGAAAGGACCTCCCCTGAGTTTTATGAAATGGTATCCAGAAAACCAAAAGCATACCCCTTCAACAATTGTTCACTCCAAAGTTGACATTTTTAGAGGCCCTCTTCTGATGCTCTCAGCAAACACTACATGGTCCTTGTGGCTTATCTTGCAGGGATTTGTTGTGAAGCAGTACCCTGCAAAACTTCGCCTCACCACTCTACAATGCTTCTTCAGCTTCATGCAGTCAACTGTTGTGGCTGTTGCAGTTGAGAGGAATAACCCTTCAGCATGGAAGCTTGGATGGGATATCCATCTTCTTTCTGTGGCATACTGTGGTGTAATTGTCACAGGCATTTGTTATTGGCTGCAAGTGTGCACGATAGAGAGTAAAGGCCCAGTTTTCACAGCCATGTTCACTCCTCTAGCTCTTATAATCACAGCAATATTTTCAGCATTGTTGTGGAAAGAAACACTTTATTTGGGAAGTGTTGGTGGCACTGTTTTACTAGTGATTGGACTCTATAGTGTCCTATGGGGGAAGAGCAAGGAGAATGTAAAAGTTCAAAACTTAGAAGCTCAACAAACAAAAGAGGAAAGTAAATTGGAGTGCATTGTACAGCATTGA 1080 0.4204 MKSFLLGCVATVEKNRPYVAMVFIQFVYAGMALLSKAAISKGMSPYVFVVYRQAFASLVLSPFAFFESNQSAPLSCNFLCKLFLVSLVGLTLSSNLYYVSINYTTATFAAASTNTVPAITFIMALLLRAESIFIKREHGLAKILGSILSLSGAITFALVKGPPLSFMKWYPENQKHTPSTIVHSKVDIFRGPLLMLSANTTWSLWLILQGFVVKQYPAKLRLTTLQCFFSFMQSTVVAVAVERNNPSAWKLGWDIHLLSVAYCGVIVTGICYWLQVCTIESKGPVFTAMFTPLALIITAIFSALLWKETLYLGSVGGTVLLVIGLYSVLWGKSKENVKVQNLEAQQTKEESKLECIVQH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03371 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 334 - -
Spst4g03371 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 150 - -
Spst4g03371 359 Coils Coil 334 354 - -
Spst4g03371 359 Pfam EamA-like transporter family 18 150 IPR000620 GO:0016020
Spst4g03371 359 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020
Spst4g03371 359 PANTHER WAT1-RELATED PROTEIN 17 344 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03371 Spst-Chr4 73790262 73795282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03371 16 336 Nodulin-like Gene Family AT2G39510 39.752 3.52e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03371 - - gmx:100800562 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03371 4 73790262 73795282 Spst4g03371 4 73790262 73795282 ECH