Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03368 ATGGAGGCTGTTGTGACCTATGGTCCTAGCATGCTTCCTACAATCGATTTGACAACAAGTGTGTTCATAATGGAAAAAATCTCAACCCGATATGGTAAAGTTGATCGTGGAGATATTGTAATCTTGCGCCATCCTCAGCATCCTACACGTAAAATCACCAAACGTGTGATTGGATTGGAGGGTGATAGGATTACATACAGTTCCAATCCTAAGAGCAATAGATTGGAGGATGATAGTTTAAAATACATTTCCCATCCTGAGAACAATGATAAGCTTGAGACGATTGTGGTTCCAAAGGGTGGCGTTTGGGTAGAGGGAGATAACAAATATAACAGCCAGGATTCAAGAAAATTTGGTTCTGTTCCTTATGACCTTATTCAGGGCAGGATATTCTGGCGGATAACACCATTTAAATATTTTGGACCGTTCTGGCATAAATGA 441 0.4036 MEAVVTYGPSMLPTIDLTTSVFIMEKISTRYGKVDRGDIVILRHPQHPTRKITKRVIGLEGDRITYSSNPKSNRLEDDSLKYISHPENNDKLETIVVPKGGVWVEGDNKYNSQDSRKFGSVPYDLIQGRIFWRITPFKYFGPFWHK 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03368 146 CDD S26_SPase_I 2 130 IPR019533 GO:0004252|GO:0006465
Spst4g03368 146 Gene3D Umud Fragment, subunit A 8 136 - -
Spst4g03368 146 SUPERFAMILY LexA/Signal peptidase 2 144 IPR036286 -
Spst4g03368 146 ProSitePatterns Signal peptidases I signature 3. 102 115 IPR019758 GO:0004252|GO:0016020
Spst4g03368 146 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 2 143 - -
Spst4g03368 146 PRINTS Bacterial leader peptidase 1 (S26A) family signature 52 64 IPR000223 GO:0006508|GO:0008236|GO:0016020
Spst4g03368 146 PRINTS Bacterial leader peptidase 1 (S26A) family signature 97 116 IPR000223 GO:0006508|GO:0008236|GO:0016020
Spst4g03368 146 Pfam Signal peptidase, peptidase S26 7 133 IPR019533 GO:0004252|GO:0006465
Spst4g03368 146 NCBIfam signal peptidase I 6 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03368 Spst-Chr4 73747521 73748386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03368 11 143 MADS-box Gene Family AT1G29960 48.120 6.33e-37 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03368 K09647 - gmx:100526949 222.631