Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03365 ATGCAGCTAGGAGACTCAAGTGTGTTGGAGATCTCCTCCCACAACGAGCCCGAGATGGCGGTGGCGGCGGCGGAGGTGGCGGCGGAAGGAGCGGCACATGACGGTGGTGGTGATGAGATGATTGGGATGGATGTGGATGCGAATTCAGGTGAAGGAAATGAAGGTAGTAAGATGAGCTTTGGAGGAAACCGGTGGCCTCGCCATGAAACCTTGGCTCTCTTGAAGATAAGGTCGGATATGGATGCAGTGTTTCGAGATTCAACTCTTAAAGGTCCACTGTGGGAAGAAGTTTCAAGGAAACTTGCAGGGCTTGGGTATCATAGAAGTGCAAAGAAGTGCAAGGAAAAGTTTGAGAATGTGTACAAGTACAACAAGAGAACCAAAGAGAACAAAAGTGGCAAATCACATGGAAAAACCTATAAATTCTTTGATCAATTACAAGCCCTTGAGAATCAATTCACAATCTCTTACGTGCCAAAATCACAACCTACTTTGGCAACAACAAACACAGTGACATTGCCAACTAGACAAAGTGATCATGGCAACAGCATAGTTATACCTTTTCCTTCCACTAACCCTACACTCATTTCTCCTTCACCACAAACCAACACCACCACCACAATATCCACAACCAACCCTAGAGACACATCACCACCACAAACCACCACTACCAACAACAACAATGTCACATACTCTTTGCCAAACATGAACACCCCTTTCTCAACCACCACCACTACCACCACCTCCACCTCTTCTTCCACAGCATCTGATGAAGACTTGGAAGAGAGGTATAGGAGGAAGAGAAAGTGGAAGGACTACTTCAGGAGGCTCACTAGAAAGGTCCTTCTGAAGCAAGAGGAAATGCAAAAGAAGTTCTTGGAAGCCATGGACAGAAGGGAGAGAGAAAGAGTGGCGGAACAAGACAATTGGAGGATGCAAGAAATGGCAAGGATTAATAGGGAACATGAGATTCTTGTTCAAGAAAGATCAACAGCAGTAGCCAAAGATGCTGCAGTCATTGGATTATTGCAAAAGATGTATGGCCAGCAAAACCCCACACAAAATGACCATTTACAACCACCACAACATGAGAAGCAAACAAAGCCACAATCACAGCCTCCAACACTAATGCTAAACAATAATTCTGAGATCAGGAAAATGAATATTAATGGTCACAGTGCTACTAGTACTAGCACTACTACTGCTGCTACTACTGTTACCACCTCTCCAGTGAGTTCTTCTTCTTCTAGATGGCCAAAGGCCGAAGTTCATGCTTTGATAAGGTTGAGGACAAGTCTTGACACCAAGTATCAAGAAAATGGACCCAAAGCTCCATTGTGGGAAGATATATCGATTGCAATGCAGAGGCTTGGGTACAACCGCAGTGCAAAGAGATGTAAGGAAAAGTGGGAGAACATCAACAAGTACTTCAAAAAAGTGAGGGATGGTAACAAAGAAAGGCGTGAAGATAGCAAAACATGTCCTTATTTTCACGAGCTTGATGCTATATACAAGGAAAAGAGCAAATCCCAGAATCCCTTTGGCGTGTTCCAGAACATGAAGCCAAATGAGATGATGATGATGGAACCATTGATGGTGCAACCGGAGCAACAATGGAGGCCTCCACCTCAATTGTTTGAAGAGGATATAGGGAGGAGTGCCAGTGAAGAATATCAAGAAAAAGAAGAAGAAAATGGTGGTGGTGGTGATGATGATGATGATGTTGAAGAAGATGGAGATAGTGTGGAAGATGAAGCGTGTGAGATTGGGACAAATAGTTAA 1782 0.4411 MQLGDSSVLEISSHNEPEMAVAAAEVAAEGAAHDGGGDEMIGMDVDANSGEGNEGSKMSFGGNRWPRHETLALLKIRSDMDAVFRDSTLKGPLWEEVSRKLAGLGYHRSAKKCKEKFENVYKYNKRTKENKSGKSHGKTYKFFDQLQALENQFTISYVPKSQPTLATTNTVTLPTRQSDHGNSIVIPFPSTNPTLISPSPQTNTTTTISTTNPRDTSPPQTTTTNNNNVTYSLPNMNTPFSTTTTTTTSTSSSTASDEDLEERYRRKRKWKDYFRRLTRKVLLKQEEMQKKFLEAMDRRERERVAEQDNWRMQEMARINREHEILVQERSTAVAKDAAVIGLLQKMYGQQNPTQNDHLQPPQHEKQTKPQSQPPTLMLNNNSEIRKMNINGHSATSTSTTTAATTVTTSPVSSSSSRWPKAEVHALIRLRTSLDTKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKVRDGNKERREDSKTCPYFHELDAIYKEKSKSQNPFGVFQNMKPNEMMMMEPLMVQPEQQWRPPPQLFEEDIGRSASEEYQEKEEENGGGGDDDDDVEEDGDSVEDEACEIGTNS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03365 593 PANTHER FI21293P1 29 556 - -
Spst4g03365 593 FunFam Trihelix transcription factor GT-2 418 479 - -
Spst4g03365 593 MobiDBLite consensus disorder prediction 350 378 - -
Spst4g03365 593 MobiDBLite consensus disorder prediction 392 416 - -
Spst4g03365 593 CDD GT1 417 481 - -
Spst4g03365 593 ProSiteProfiles Myb-like domain profile. 416 474 IPR001005 -
Spst4g03365 593 MobiDBLite consensus disorder prediction 541 593 - -
Spst4g03365 593 FunFam Trihelix transcription factor GT-2 65 126 - -
Spst4g03365 593 Gene3D - 418 479 - -
Spst4g03365 593 Gene3D - 65 126 - -
Spst4g03365 593 MobiDBLite consensus disorder prediction 563 585 - -
Spst4g03365 593 SMART sant 414 476 IPR001005 -
Spst4g03365 593 SMART sant 61 123 IPR001005 -
Spst4g03365 593 MobiDBLite consensus disorder prediction 190 257 - -
Spst4g03365 593 ProSiteProfiles Myb-like domain profile. 57 121 IPR001005 -
Spst4g03365 593 MobiDBLite consensus disorder prediction 190 255 - -
Spst4g03365 593 CDD GT1 63 128 - -
Spst4g03365 593 Pfam Myb/SANT-like DNA-binding domain 416 503 IPR044822 -
Spst4g03365 593 Pfam Myb/SANT-like DNA-binding domain 63 149 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03365 Spst-Chr4 73712233 73714784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03365 60 539 Trihelix Transcription Factor Family AT1G76880 49.598 1.79e-136 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst4g03365 Myb_DNA-bind_4 1.1e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03365 - - gmx:100776819 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03365 4 73712233 73714784 Spst10g00866 10 9246725 9249371 PCT