Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03362 ATGGAAGGGAATTTGTCTCAAGGAGGTATGGTTCAAGGTGAAAGTTCTTTTGGTGGTTTTGATTTGCCTGGATCAATGCGGGTTCATCGGCAAGGACATCATCCTCATTCCATGAATCAGCATCAAACTCATCCTTGTCAAGGGCCTTCAGGTCATTCCTCAGTTCCTGATAGTTTTCCTCTTACAATGGGAACCATGCAGAACTGCGACCAGACAATGTCAATGACTGAGTTTAGTCAAGGAGATAGAAACAAGAACTCACCAAGTGATGAAAGTTTTGCTGAGGAAGGGGTTGAGGGTCATCATGAAGGAGCTAGAGGGAGAAAGGGATTGCCTTGGCAGCGGGTGAAGTGGACTGATAAGATGGTGAGGCTTCTGATAACGGCTGTTTCTTACATAGGTGAGGATGCAGCATCTGACTGTGGAGGCGGAAGGAGAAAATTTACAGTCCTACAGAAAAAGGGGAAGTGGAAATCGGTTTCCAAAGTCATGTCTGAAAGAGGTTATCGAGTTTCACCTCAGCAATGTGAGGATAAATTTAATGATCTTAATAAAAGGTACAAAAAACTTAATGATATGCTAGGCAGGGGAACTTCTTGTGAGGTTGTTGAAAATCCTTCTTTATTGGATGTGATAGATTATCTTTCTGAGAAAGAAAAAGATGAGGTTCGAAAAATATTGAGCTCAAAACACCTCTTCTATGAAGAGATGTGTTCTTACCATAATGGTAACCGGTTGCATTTACCCCATGATCCGGCATTGCAACGATCACTGCAGTTGGCTCTCAGAAGTAGAGATGATCATGACAATGATGATATCAGAAGGTCCCATCATGATGATCATGATGAAGACGATCTAGAAATGGAAACTGATGATCATGATGACTTTGAGGAGAATTATGCTTCCCATGCAGATAGTAGAGGAGTCTATGGGGAGGCAGGGCGACCTTTGAAGAGATTGAAGCCAGGGCAAGGACAAGAAGAAGCTGCTACTTTTGGTTGTGCTTTAAACAGCCAAGGGTACAACAAAAGTTCATATCCTCATATGGTTCAATCTGATGTTAATCAAGCTGCACCCGAAAAAATGAGGGCAGCTTGGCTAAAGAAGCAATGGGTTGAATCTCGTTCACTTCAGTTAGAAGAGCAGAAGCTACAAATTCAGGTTGAGATGTTGGAGCTAGAGAAACAAAGATTCAAGTGGCAGATGTTTAGTAGGAAAAAAGACAGGGAGTTGGAAAAGTTGAAGCTGGAGAATGAAAGAATGAAGCTTGAAAATGAACGTATTGCTTTAGAACTAAAGCGGAAGGGAAAGGGAGCAAGTGCTGGCTTTAACTAG 1335 0.4217 MEGNLSQGGMVQGESSFGGFDLPGSMRVHRQGHHPHSMNQHQTHPCQGPSGHSSVPDSFPLTMGTMQNCDQTMSMTEFSQGDRNKNSPSDESFAEEGVEGHHEGARGRKGLPWQRVKWTDKMVRLLITAVSYIGEDAASDCGGGRRKFTVLQKKGKWKSVSKVMSERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCEVVENPSLLDVIDYLSEKEKDEVRKILSSKHLFYEEMCSYHNGNRLHLPHDPALQRSLQLALRSRDDHDNDDIRRSHHDDHDEDDLEMETDDHDDFEENYASHADSRGVYGEAGRPLKRLKPGQGQEEAATFGCALNSQGYNKSSYPHMVQSDVNQAAPEKMRAAWLKKQWVESRSLQLEEQKLQIQVEMLELEKQRFKWQMFSRKKDRELEKLKLENERMKLENERIALELKRKGKGASAGFN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03362 444 MobiDBLite consensus disorder prediction 77 108 - -
Spst4g03362 444 Coils Coil 374 396 - -
Spst4g03362 444 MobiDBLite consensus disorder prediction 265 283 - -
Spst4g03362 444 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Spst4g03362 444 Coils Coil 404 433 - -
Spst4g03362 444 PANTHER F16F4.11 PROTEIN-RELATED 1 438 - -
Spst4g03362 444 Gene3D - 118 189 - -
Spst4g03362 444 MobiDBLite consensus disorder prediction 38 57 - -
Spst4g03362 444 MobiDBLite consensus disorder prediction 1 57 - -
Spst4g03362 444 MobiDBLite consensus disorder prediction 265 290 - -
Spst4g03362 444 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03362 Spst-Chr4 73609165 73610499 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Spst4g03362 Myb_DNA-bind_4 1.1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03362 - - gmx:100812134 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03362 4 73609165 73610499 Spst4g03362 4 73609165 73610499 ECH
Spst4g03362 4 73609165 73610499 Spst10g00869 10 9281097 9282437 PCT