Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03351 ATGTCATCAAATCAAACATCCCTCAACCAAGCCAAGTTTGCCCTTCCAAACAATGACCTTGAGCGACATGCAACAAATCTAGAGATTGAATCTGTGGACAACTTTGACTACTCAAAAAGATCTCAATGGCTGCGTGCTGCTGTGTTGGGAGCCAACGATGGTTTGGTTTCAACAGCATCACTGATGATGGGTGTTGGAGCAGCAAAGCAAGACATCAAGGCCATGATCATATCAGGGTTTGCAGGGTTGGTGGCAGGAGCGTGCAGCATGGCCATAGGGGAGTTTGTGTCTGTTTACTCACAACTTGACATAGAGGTTGCCCAAATGAAGAGAGAGAAGGAAAGGATGCAAGGTAGTGACAGAGAAGTGGAAGATACCGGGGAACAGAAAGAAAGCTTGCCAAACCCTTTACAAGCAGCAGCAGCCTCAGCTTTAGCCTTTGCTGTTGGTGCAATGGTACCATTGCTTGCAGCCTCCTTTATAAAGGACTACAAGGTGAGGCTTGGGGTGGTTGTGGCTGCTGTGACCTTGGCTTTGGTGGTGTTTGGTTGGTTAGGGGCTGTGTTGGGTAGGGCTCCGGTGTTTAGGTCTGCTGCGAGGGTCTTGGTTGGGGGTTGGATGGCCATGGCCATTACTTTTGGTCTAACCAAGTTGATTAGTTCAAGTGGACTCTAG 675 0.4874 MSSNQTSLNQAKFALPNNDLERHATNLEIESVDNFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAAKQDIKAMIISGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERMQGSDREVEDTGEQKESLPNPLQAAAASALAFAVGAMVPLLAASFIKDYKVRLGVVVAAVTLALVVFGWLGAVLGRAPVFRSAARVLVGGWMAMAITFGLTKLISSSGL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03351 224 CDD Nodulin-21 42 193 - -
Spst4g03351 224 Coils Coil 99 119 - -
Spst4g03351 224 MobiDBLite consensus disorder prediction 111 132 - -
Spst4g03351 224 Pfam VIT family 44 121 IPR008217 GO:0005384|GO:0030026
Spst4g03351 224 Pfam VIT family 128 216 IPR008217 GO:0005384|GO:0030026
Spst4g03351 224 MobiDBLite consensus disorder prediction 111 129 - -
Spst4g03351 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 220 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03351 Spst-Chr4 73504296 73504970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03351 17 224 Nodulin-like Gene Family AT3G43660 68.900 9.23e-100 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03351 K22736 - pop:7466401 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03351 4 73504296 73504970 Spst10g00875 10 9332173 9332829 PCT