Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03350 ATGGATGCGCAAGCCAAGAAAAAGGCTTTGTTCCGTGCTAAATTGAATGCTCAGAAGAAGGAAAAGCGCATAGAATCTCCCCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTGAAGTCTGAATCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCATGAGGCAATAAGTAATCTGAAAGCTAATGCAGCTGGATTAACTCAACAAAACAATGCAAAGCCTGTTTCTGATACCAGCATTCCCAAGGCTAAACTAGAACATCCTTTGGGCTCACAATCCAAACTTCCAGAAGGTTCACAAGAAGTGTCTAAACCTCAATCATCGTCAGTGCTTCCACCAGGTTTTTTTGATGACAGTGATTCAGGAAAGACAAGATCTGAACATTTAGCAGACTCTAATTTAGGGAGAACTCCTGGGGTTTCTGCTCAAAATCAGGTGTTAAACTTGGAGAAGGAGAAAGGTCATTTTCATGACAATAATGCTGCAGAGTCAAATGTTAGCCAGACATCAGTCAAGACTGCTGATACAGAGGTTAAGCAAGTAAAAGGGAGTCTTCCTGAAGGATTTTTTGACAATAAGGAAGCTGATTTGCGTGCTCGTGGCATAAAGCTTGTTAAGCCGGATGTCAAAGACGAGTATAAGGAATTTGAGAAGTTGATTCAAGAAGATTTGAAGGAGGTTGACAACCGGTTGGAGGAAGAAGAGATTGATGCGGCCGAAATGATAGAAGAAGCTGAATCTGTAGAGCAGAAGATCTTCAGGGAGAAAGTGCAAATGTTGAAGAAGAGGAGATTGGAAATAAAAGCTGCTAATGCTGCAAAGCGTAATAAATCATCTGAGGTTGCAGCCAAGGAGTCTACACACGATGAGTCATCCAGTGATGATGAAAGTGGAGAAAATTTTGCCGTGGATTGGAGAGCACAACACTTGTGA 960 0.4167 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHHEAISNLKANAAGLTQQNNAKPVSDTSIPKAKLEHPLGSQSKLPEGSQEVSKPQSSSVLPPGFFDDSDSGKTRSEHLADSNLGRTPGVSAQNQVLNLEKEKGHFHDNNAAESNVSQTSVKTADTEVKQVKGSLPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLKEVDNRLEEEEIDAAEMIEEAESVEQKIFREKVQMLKKRRLEIKAANAAKRNKSSEVAAKESTHDESSSDDESGENFAVDWRAQHL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03350 319 Gene3D Classic Zinc Finger 32 70 - -
Spst4g03350 319 MobiDBLite consensus disorder prediction 280 311 - -
Spst4g03350 319 MobiDBLite consensus disorder prediction 97 149 - -
Spst4g03350 319 MobiDBLite consensus disorder prediction 102 123 - -
Spst4g03350 319 MobiDBLite consensus disorder prediction 280 319 - -
Spst4g03350 319 Coils Coil 226 260 - -
Spst4g03350 319 PANTHER UNCHARACTERIZED 1 319 IPR040050 GO:0003676|GO:0005681|GO:0008270
Spst4g03350 319 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Spst4g03350 319 Pfam Zinc-finger of C2H2 type 39 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03350 Spst-Chr4 73478590 73488156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03350 1 319 C2H2 Transcription Factor Family AT3G02860 51.952 1.40e-95 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03350 K13104 - gmx:100808515 503.827