Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03275 ATGACTCATGAGGATTGGGATCTCTTTGCCATAGTTAGAAGTTGTAAAGCTGCCACCTTTACTGCAACCACAAACACAGAAACCCCACCCACCACCACCACTCCTAGATCCCCAAACACTGACTCTTGCTTGGATGTGAGCCAAGAACATGGCTCATTCTCTTTTCCCAATCTTGTGCAACCAACAACCAATGAGTTTCAAGAACTTCACCAGTTGCTAATAAACTTCAACCCCACCACTACCACCATTTCTAGCACTATCTCTAGTGGTATTGGCATCAATCCCAATTCCACTTTTTCTGACGTTGCGGGATTCATTGGACAACAGCAGATACCACAAGGTCATCACCATCATCTAGTTCCTGCTCCGACAAATCACACCTCCATTGGAGCATCCTCCGCTACTGGTTTTGACAGATTCCAACACCATCACCGTCACCACCAACATCAACCCCTAACCCCAGAACAACAGCAACAAAAGCAAAACCAACCACACCTTCACGCACCCCAAACAAGTCCCACCCTTTCACCAACCACACAACCACAAACACACAGATCGAGAAAGAGAAAAAACCACCAGAAGAAAATGGTGTGCCATGTAACCGCAGACAACCTCTCAGCAGACTTATGGGCATGGCGAAAATATGGACAAAAACCAATCAAAGGCTCTCCATATCCAAGATGTAGTAGCTGCAAAGGCTGTGCTGCGAGAAAGCAAGTGGAGAGAAGCACCACCGAACCCAACACGTTCATCGTGACCTACACCGGCGACCACAAACACGCCAAACCCGTTCACCGGAACTCCCTCGCCGGAAGCACCAGAACCAAGCCATCCCCGACCCGTTTACCCGAAACCCATGAAGCTATCTCTAGTCTCAAAATAGAAAACGCCCGTTCATCGACTTCTGAGCTTTCTTTCACGTCGTTAAAGTCCGGCTTGCCGGAAAACGAGGAAACGGTCGCCGCCGGCGAATCCGATTGCGTGGAGATGGAAACTGACCCTGATGCAATCTCCGAAAACGACGACGACGACGTTTTGATACCCAACACGGGTGCCATGTCGGACGCTGTTCTCTTGGGGTTAACCAATAATGAGTTGAAAACAAACGGGTTGGATCCGACTAGCGTTTCAAGGTGA 1137 0.4899 MTHEDWDLFAIVRSCKAATFTATTNTETPPTTTTPRSPNTDSCLDVSQEHGSFSFPNLVQPTTNEFQELHQLLINFNPTTTTISSTISSGIGINPNSTFSDVAGFIGQQQIPQGHHHHLVPAPTNHTSIGASSATGFDRFQHHHRHHQHQPLTPEQQQQKQNQPHLHAPQTSPTLSPTTQPQTHRSRKRKNHQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPYPRCSSCKGCAARKQVERSTTEPNTFIVTYTGDHKHAKPVHRNSLAGSTRTKPSPTRLPETHEAISSLKIENARSSTSELSFTSLKSGLPENEETVAAGESDCVEMETDPDAISENDDDDVLIPNTGAMSDAVLLGLTNNELKTNGLDPTSVSR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03275 378 MobiDBLite consensus disorder prediction 152 182 - -
Spst4g03275 378 MobiDBLite consensus disorder prediction 23 42 - -
Spst4g03275 378 SUPERFAMILY WRKY DNA-binding domain 201 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst4g03275 378 MobiDBLite consensus disorder prediction 112 197 - -
Spst4g03275 378 SMART WRKY_cls 206 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g03275 378 Pfam WRKY DNA -binding domain 208 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g03275 378 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 359 IPR044810 GO:0003700
Spst4g03275 378 ProSiteProfiles WRKY domain profile. 201 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g03275 378 MobiDBLite consensus disorder prediction 259 284 - -
Spst4g03275 378 Gene3D WRKY domain 190 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03275 Spst-Chr4 72414044 72415519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03275 154 278 WRKY Transcription Factor Family AT4G01250 58.333 3.47e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst4g03275 WRKY 4.7e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03275 - - gsj:114367469 480.33