Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03247 ATGAAGGTCTCAATATCAACCCCACTCTTTGGCATCCCATTATGGGCTTTGCTGCTGCTAGTTTCAATACTAGCATTCATTGTTGTGACATGCGTCATCTTGTGCTTTAACTTCATTTACTATCCTCTTCAAAAATCATGCAAACCTCGCTTTTCTTTACCTAAATCAATAGCATGCAAGAACAACAATGGTGATTTTAGCTCTTCCTCTCTTGACAAGAGGTTACTATCAGTGTCAGGAAATGTCTCAGAACACATCATGAACTTTGAGAGGTTGTCATCAGGTTATTACAATCATGATGAGTTGGTCCTCATTGACCAGTTTTATCCGATGGCATATGGCATTGCAAATGATCGATATTTTGAAGGTTTGGGATCAAGAGGTAAATTATGTTCCATAGTCAATGATAAGAGTAAGGGGTGGTGCTTTAGCCTTAAGGAGATACAGGATGCTACTAATGGATTTGCAAAAGAAAATGAGGTTGGACGTGGAGATAATGGAATTGTTTATCTTGGTTTGTTGCCAAGTAATAGACAGGTGGTTGTGAAGAGACTAGTGTGTGACAGTGGCCAACCTGAGGAACTTTTTGCATCCCAAATGGAAGCAATAGGACGTGCAAAGCACAATAACCTGGTCAAATTACTTGGATATTGTGCTGAGGGTGCTTACAGGATGTCAGTATCTGAATATGTAGCTCATGAAAGTCTGCATCACTGGCTTCATGAAATTCCTGAAGCACAAATCACCCCTCTGACATGGGATATAAGAAAGAACATAATCCATGGTGTGGCAAAAGGACTGGCATACCTTCATGATGAAGTTAAACCAAAGATTATCCACGGCAGCATAAAATCTAGAAACATTTTGCTGGACCACAACTGGAATTCAAAAATATCTGATTTTGGTCTTGTTAAGGTTCTCAGTCCCAAAAGGAGTAACGTTGTACTGGAAGTGGATGCATTGGGTAACGAAACTCCAGATTGTCATTCAAGTACTACCTTAACTGAGGGTAATGACATTTATGATTTTGGATTACTTATTATGGAGATTGTATCAGGAAGAATCCCTTCATATCACAGTCAGACAGAGACTCATATGGTGGACTGGTTCAAATCAATGATTTCCAGTGGAAAGATTGAGAATGTGATGGATCCAAAATTGATTAAAATGCCTTCTTCCAAGGTACTTAAAGAGGTTGCTTTAGTTGCTCTACGATGTGTAGATCCTGATGTGAATCCTAGACTCAAGATGAGAGATGTGGTTTGCATGCTTGAAACCAACATTCTTCTTTTTGAGCATTTGTGA 1305 0.3923 MKVSISTPLFGIPLWALLLLVSILAFIVVTCVILCFNFIYYPLQKSCKPRFSLPKSIACKNNNGDFSSSSLDKRLLSVSGNVSEHIMNFERLSSGYYNHDELVLIDQFYPMAYGIANDRYFEGLGSRGKLCSIVNDKSKGWCFSLKEIQDATNGFAKENEVGRGDNGIVYLGLLPSNRQVVVKRLVCDSGQPEELFASQMEAIGRAKHNNLVKLLGYCAEGAYRMSVSEYVAHESLHHWLHEIPEAQITPLTWDIRKNIIHGVAKGLAYLHDEVKPKIIHGSIKSRNILLDHNWNSKISDFGLVKVLSPKRSNVVLEVDALGNETPDCHSSTTLTEGNDIYDFGLLIMEIVSGRIPSYHSQTETHMVDWFKSMISSGKIENVMDPKLIKMPSSKVLKEVALVALRCVDPDVNPRLKMRDVVCMLETNILLFEHL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03247 434 PANTHER OS01G0323000 PROTEIN 3 430 - -
Spst4g03247 434 Pfam Protein kinase domain 156 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03247 434 SUPERFAMILY Protein kinase-like (PK-like) 137 425 IPR011009 -
Spst4g03247 434 Gene3D Phosphorylase Kinase; domain 1 126 230 - -
Spst4g03247 434 ProSiteProfiles Protein kinase domain profile. 155 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g03247 434 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524
Spst4g03247 434 Gene3D Transferase(Phosphotransferase) domain 1 231 429 - -
Spst4g03247 434 FunFam Putative receptor-like serine/threonine-protein kinase 231 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03247 Spst-Chr4 72190062 72192571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03247 131 424 Receptor kinase-like Gene Family AT3G58690 35.526 2.12e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst4g03247 Pkinase 3.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03247 - - vra:106762086 697.197